Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02206 ATGGCCAAAATCGCTCTAGGAAGCACCCGTGAGGCCACTCAGCCAGACTGCATTCAGGCCCTGGTCGTTGAATTCATAGCTACCTTCCTCTTTGTGTTTGTTGGTGTTGGTTCTTCCATGGTGGTTGACAAGCTAGGCGGGGATGCACTAGTAGGCTTGTTTGCTGTGGCCGTCGCGCATGCGCTCGTGGTGGCCGTTATGATCTCCGCCGCCCACATCTCCGGTGGCCACCTCAACCCCTCCGTCACCCTTGGCCTCCTTGTCGGCGGTCACATCACCGTCTTTCGTTCCATCCTTTATTGGATTGATCAATTAGTGGCAGCCGCAGCAGCCTCTTATCTCCTTTACTACCTCTCCGGAGGACAGGCAACTCCAGTTCATACGCTGGCCAATGGAGTTGGGTATGGCCAAGGAGTAGTTTGGGAGATTGTGTTGACGTTTTCTTTGTTGTTCACTGTGTATGCGACCATGGTGGATCCAAAGAAGGGAGCACTAGCTGGGATTGGGCCAACGCTGGTTGGGTTTGTAGTGGGGGCCAACATCCTGGCTGGTGGGCCTTACTCCGCTGCTTCTATGAACCCGGCAAGGTCTTTTGGGCCCGCCTTGGTTGCTGGCAACTGGACCGATCACTGGGTTTACTGGGTTGGGCCTCTCATTGGTGGTGCCCTCGCCGGTTTCATCTACGAGACTTTCTTCATTCACCGATCTCATGTTCCTCTTCCTCGTGATGAAGAAAACTAA 741 0.5425 MAKIALGSTREATQPDCIQALVVEFIATFLFVFVGVGSSMVVDKLGGDALVGLFAVAVAHALVVAVMISAAHISGGHLNPSVTLGLLVGGHITVFRSILYWIDQLVAAAAASYLLYYLSGGQATPVHTLANGVGYGQGVVWEIVLTFSLLFTVYATMVDPKKGALAGIGPTLVGFVVGANILAGGPYSAASMNPARSFGPALVAGNWTDHWVYWVGPLIGGALAGFIYETFFIHRSHVPLPRDEEN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02206 246 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Pste2g02206 246 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 FunFam Probable aquaporin TIP1-1 2 244 - -
Pste2g02206 246 NCBIfam MIP family channel protein 24 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 SUPERFAMILY Aquaporin-like 11 242 IPR023271 -
Pste2g02206 246 PANTHER AQUAPORIN-8 4 237 IPR034294 -
Pste2g02206 246 Pfam Major intrinsic protein 13 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste2g02206 246 Gene3D Glycerol uptake facilitator protein. 2 242 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02206 Pste-Chr2 22048928 22049866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02206 1 245 Major Intrinsic Protein MIP AT2G25810 75.510 3.48e-126 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02206 2 22048928 22049866 Pste2g02206 2 22048928 22049866 ECH