LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g02197	CCAACTTCTAAAAACAAAATCAAACCCTACAATTACAACATTAGAGAACCTGTACTTGCTACTTTTCATTCCCCCCGTCCCCTCTCTCTCTCTCTCTCTCCAAGGCCAAGGCTTAGGCTAAAGCGCGTCTGCTATGGCAAACATGGAGAGGGTCATCGGTGGGAAGTTTAAGATTGGTCGGAAAATCGGGAGCGGCTCATTCGGAGAAATTTATATTGCCTCAAATATGGACACCTCTGAGATTGTCGCCATCAAGATGGAAAGCAAGAAAACCAAACATCCACAACTGTTGTATGAAGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTATTCCGAGTATGAAGTGGTGTGGTACTGATGGGGACAATAATGTTCTAGTTATTGATCTTCTCGGAAGGAGTCTTGAAGACCTTTCTGTCTATTGCGGGAGGAAGTTTTCACTGAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACAAGAATAGAGTACTTGCATTCCAAGGGATTTTTGCATAGAGACATCAAACCAGATAATTTCCTTATGGGTCTTGGGAGGAAATCAAGTCAGGTTTATATTATTGATTTCGGACTAGCAAAAAGATATAGGGACCCTAACACAAACAAGCATATTCCATACAGGGAGAATAAAAGCTTAACTGGAACCGCGCGTTATGCAAGTTGCAACACTCACACAGGAATTGAACAAAGTCGTCGAGATGATTTGGAGTCTCTTGGTTACGTGCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTTTGAAAGCTGCCACCAAAAAGGAAAAATATGACAATATTTGTGAGAAGAAATTATCAACTCCCGTTGAGTTGAACTCCCTGCCACAATACAGTTTTCAATACTCTTTTACTCTGACCTTCATAATGTGGCTTACAGGTGGAGTCCCCTGCCCTTCTCTATTTTTTGTTAAGAGTGGGACTGTGGAAGAAAAGGCCAAAGCGCTTTGCAAGTCATATCCTGTGGAGTTCGCTACTTACTTTCATTATTGTCAATCTTTGAAATTTGATCAACCCCCAGATTATGAATTCTTGAAGTGTCTGTTTCGTGATTTGTTCAAAAGTGAAGCTGCAGTGCCCATCAGTCTAGAACCAGTACTTGTGGGAAAGCACGGAGGAGTCAATGATTCAGGTCATGTTACTGTGACAAAAATGTTAGCCAATCTTGAACGTCCAAGTGCATGTGTGCAGGCTAAGCCATCTAATGTTCGGAATCTGGATGTCATTCAGACTAACAAAAGTGGTGTGAACAATAGTTCATCTCCTTCCTTTGCCATGCCCAAATCCTCTACAGAAAATGTTTCAAAACCAGAAAGGTCGTCAGGAACCTCAAATCTCGGTCGTGTATTTGGGAGTAACTCCCGTGTTTCAAGCAGCTGGATTCCTTCACTACGCCGAATTTCTTCAGCCAAATAGTTGACAGGATTTTGAAGGTGTCACTTAGAGCATTTTTTCACTGTTGCAAATGTCATGCGCTCGTGTCTCTCCACCAGAGAAACATTGGGTTAGACTGTAATGACTAACAAGATTTAGTGACATGAGTAACTTCCTGCACATAATACTATTTCCAAATGAATTGGTGGATATATTGTTGCTGAGTGAGAGGGATGCCCTCATTTTTAAGAGTTGGAAAGAGGGGAAAGTAAGGGAGTATGAACGATTTCGAAGAATGAGATATGCTAGTGGATGTGCACACGAGACTCAGGATAATTGGTTGGTGGGCCTTAAAAGTGAGAGTTAGGCGGGGTTGTATTTTTTTCCTAATTATGTTGAATCAAACATGTAGGAGTGGGGGGAAGCCACAATCATTCTTATTGTACCGCTATTCTTTTTTTTCTATTCACCATTTTCTTCTTTTCTCGACATTCATTATACAAATTTGTTTGTCTTTTCCTTTGTACAGTTAGTTTTTGTCAGCATACGGATATAATCACATTGTACCCTAATTCCAACAACGGAATTGTTCACAAGTTATCCAATTTATAGTTATTTGATATTAACGGATCCAGTTTTGTTCTTGTTGAATTGTTGTTGGAGTAAAGCTTAGCCTATTCATCTTTGGACTTGGG	2112	0.4044	MANMERVIGGKFKIGRKIGSGSFGEIYIASNMDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGESGIPSMKWCGTDGDNNVLVIDLLGRSLEDLSVYCGRKFSLKTVLMLADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGRKSSQVYIIDFGLAKRYRDPNTNKHIPYRENKSLTGTARYASCNTHTGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICEKKLSTPVELNSLPQYSFQYSFTLTFIMWLTGGVPCPSLFFVKSGTVEEKAKALCKSYPVEFATYFHYCQSLKFDQPPDYEFLKCLFRDLFKSEAAVPISLEPVLVGKHGGVNDSGHVTVTKMLANLERPSACVQAKPSNVRNLDVIQTNKSGVNNSSSPSFAMPKSSTENVSKPERSSGTSNLGRVFGSNSRVSSSWIPSLRRISSAK	441

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g02197	441	MobiDBLite	consensus disorder prediction	380	441	-	-
	Pste2g02197	441	Pfam	Protein kinase domain	13	230	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste2g02197	441	Gene3D	Transferase(Phosphotransferase) domain 1	254	334	-	-
	Pste2g02197	441	Gene3D	Transferase(Phosphotransferase) domain 1	2	253	-	-
	Pste2g02197	441	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	127	139	IPR008271	GO:0004672\|GO:0006468
	Pste2g02197	441	SUPERFAMILY	Protein kinase-like (PK-like)	8	325	IPR011009	-
	Pste2g02197	441	ProSitePatterns	Protein kinases ATP-binding region signature.	18	41	IPR017441	GO:0005524
	Pste2g02197	441	ProSiteProfiles	Protein kinase domain profile.	12	344	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste2g02197	441	SMART	serkin_6	12	379	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste2g02197	441	PANTHER	CASEIN KINASE-RELATED	11	404	-	-

Showing 1 to 10 of 11 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g02197	Pste-Chr2	21998552	22004868	Wgd

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g02197	12	239	AGC Kinase Gene Family	AT3G08720	26.724	2.24e-16	79.3

Showing 1 to 1 of 1 entries

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CK1_CK1	Pste2g02197		Pkinase	9.2e-30	CL0016

Showing 1 to 1 of 1 entries