Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02192 TTTCTTTTCCTCCCTCTTAATAGGATACTTTCTGTTAAAATTGTCCAATGAAGACAGGGTTGTAACCAGTTTATTTCCTTTGCTTTGTCCATTTATCCAATTCATTTAATCATTAATAATTCAATTGCACTCAAAGTCACATTTTTTTTTTCTTACTTCCTTTTTGAGTTATCCCTGCTCCTATTTTATTTCTCCACTTAAAAATACACTTTCCCCCTTGAACTAAACCCCCCAAGAAAGTCACGCAGGTTTTACCTGGCGTGGGTTGGATTGAAACATATCCGACTTGAATTTGTATGTGGAATTTAATATTTTGAGGTAAACACCATCACTATGGGGCTATTTGGGGGCTTGTTTTTTCGGAGAATGATGTCATCCATCTTGTAGGTGACACCCTAAGTTTCCATTTATTTTAAATTGATTATTTGTGAGAATATCTGCTCAAATCAGGAAGTGGGTCGTTGGAAGATATGTATTTTCCACCTTTCATTTGATCACATTGTTCGTCCTCTGTAATTATAAAAAGGGGAACTTTTTTAGGTGGGGTTTGTACCGTGGCATTGTTTAGAGTATCTTTTCAGGCTTGAGAGTGAACAAATTGTTAATGGATCAAAACATAAGCGAAAGAAGAGGTGAGGGATTGGGTCCGGTTGATGAAGGGGTAGATGGGAATTTGAGTCATTTGGTTGAAGGGGTTGTTGTAATTGATGCATTAGATGGGGGCAGCTTGGGTGGCAGAGCTAGTATAAGTAGAGAATCTGGAACTTCAGAAGAGGTTCGTAAGGATTTAGGGTTTGGTAACGATCTAAAGACGATGCTTGAGGGAGTTAAGGGTCAGGACAAGCATGATCAAGAAAATATCAGTGATAGTAAATTGCTTGGCGTTGATCAGGGAACTAGTTATAATTCAAACCATTCGATTAATCCGGAAGTGATTGAAACCGTGGTTGTAATTGAGTCTATTCAGACTGAGTATGTCAATCATGATTATAGGAAATTGGAGGCAAACGATGATGAATCAAGATTGAGCTTGGTTTCGATGAAAGCCCCTGAAGGGGTGTCTGAAACTGATAAAAATTCATGTGTGATTGATATAAAGTGCAGCTGCCAAAAGGTTTATGAGAATTCTGAAGGTGAAAGGATTTGTAGGATTTGCCATCTGACTTCTTTGCAACCATCGGATGAAACAACTGTCGGCACTGCTAGTAGTGCCACAAGTGCAGATTTGATTCATCTTGGTTGTGCATGTAAAGATGAGCTAGGCATTGCGCATGTTCATTGTGCTGAAGCGTGGTTCAAGCTCAAGGGGAACAGACCTGCAGTTGCCTTGATAATTCCACATTATGATTTCAACAATAGTATTGGAAATGTTTTATCTATTCATGTTGGAGAACAGCTAAAATCATTACTGTACTCAGACATAGCTGTACAGTGCATATCAGTAGCCATCAGCCTATTTGGAGTTCCTATAGCTAATGACATATGGGGCACGTTATGTGAAATATGTGGTGAGATTGCAAAAAATGTTTCAGGCATTGCCAATTATGGATTTATGGAAAAATGGAATGAAAGAAGTTTCATGGATGACGGTGGTAACTCATCCAACAGGTTTGGTGGATGCTGGCGAGGACAGCCCTTTTGCAACTTCTTGATGGCTTGCCTGGTGATAGCGTTTGTTCTGCCATGGTTTTTTCGTGTAAATATGTTCTAGCTGGTGAATTAAGCTCTATCATTCTTGCCTTCAATTCTTCGTACTCGCGAAATATAGTGAGTGAATGATTCATGATTGGTTTCTCACATTATTGCTATGATGCATCATCACATTTTAGTGGGATGTTAATGTTTAACGACATGTCCAAGTTGACAACCTGAGGGTGTGTTCTTGAAGATGTGAAGCACCCATGTTTTACCAGCTCTAGTTGCATTCTTTTGAGCGAGTTCTGAGGTACAGAGAGAGTATTTTACTTTGATGGATGCAAAGAGCTTATTTGTAAGATATAAGTCAAGAACAAGAATTTGCTGCAAAACAAAGACGAAGTAAAGTTCCTTTTCTTCTTTACTTATTTTTACTATCACGAG 2079 0.3862 MDQNISERRGEGLGPVDEGVDGNLSHLVEGVVVIDALDGGSLGGRASISRESGTSEEVRKDLGFGNDLKTMLEGVKGQDKHDQENISDSKLLGVDQGTSYNSNHSINPEVIETVVVIESIQTEYVNHDYRKLEANDDESRLSLVSMKAPEGVSETDKNSCVIDIKCSCQKVYENSEGERICRICHLTSLQPSDETTVGTASSATSADLIHLGCACKDELGIAHVHCAEAWFKLKGNRPAVALIIPHYDFNNSIGNVLSIHVGEQLKSLLYSDIAVQCISVAISLFGVPIANDIWGTLCEICGEIAKNVSGIANYGFMEKWNERSFMDDGGNSSNRFGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02192 368 PANTHER ZINC FINGER, RING-CH-TYPE 78 368 - -
Pste2g02192 368 SMART ringv_2 180 237 IPR011016 GO:0008270
Pste2g02192 368 ProSiteProfiles Zinc finger RING-CH-type profile. 173 252 IPR011016 GO:0008270
Pste2g02192 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 165 310 IPR013083 -
Pste2g02192 368 SUPERFAMILY RING/U-box 175 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02192 Pste-Chr2 21931827 21935478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02192 297 367 C3H Transcription Factor Family AT5G05830 37.975 1.18e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02192 2 21931827 21935478 Pste2g02192 2 21931827 21935478 ECH
Pste3g03012 3 22964583 22968442 Pste2g02192 2 21931827 21935478 PCT