Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02189 AAGAAAATGAAATCCTTTTGCACATTCTTCATTCTCCTTGCTCTGCTGCTTCTTGTGGATTCTCAATCTTCATCCAAAGATGAAGACCAGGAGCTGATGTCAAAGGCGTTCCAATTTGTCTCTGGATTCAACTCTTCCTGGTTCCAAACTGCTCAGATTCAAGAGATAAATCTTTCGTCCAAAAACCTAAGTGGGAACATCTCCTGGAAGTATCTGAGGAACATGTCCAAGTTGGAGGCGCTAGATCTGTCTGGGAATTTTCTTCACGGACAGGTCCCAAACTGGTTTTGGAGAAGCTCAACCTTATTAGTAGTCAACCTTTCCAACAACAGGTTGGGAGGGAGCATTAATCCCATTTCCCAAAACCCTTCTTCCTTTTCACCACTGCAAAATCTCAATCTCTCAAACAATAGGTTCACCAACCAGCTTCACCTCTCTGCTTTCTCAAACCTTAAAAGCCTCGACCTTTCGCATAACAACCTCGTAGCCTTGCCTTCCGGGTTCCAAAACCTCAGCAATCTACGCCACCTCGATCTCTCCAACTGCAACATCAAAGGAAACATAAAATCAATTTCCTCCCTAACCTCACTTTCCTACTTGGACCTATCAAACAACACCTTGAACGGTAGTTTCCCATCTGATTTCCCTCCCCTGAAGAACATCAAATTCTTGAACATCTCCCGCAACAACTTCAAAGCCTCGACCACCCTAGACAGGTTCAAAAAGTTCGGCAAATGGGCCTTCATTCACGCGGGCCAAAACTTCAACTACAACTACAACGCATCCAAAACGCCGACGCTGCATTCAAGCCCACCGCAGCCCGAGCACATTCACATTCAGGCGGATAAGAAGAAGAAGAAGCGGCCGAGGGAAAAACAAAAGTCAAAACACAGAACCAGAAGCATGATTGCGGCCTTGTCCTGTGCCTCAGCACTTGTGGTTGTCGCCATGTGCATGTGCGTGGGGTGGTGTTGCAGAAGGAAGAGGCAATTGGCGAAAAGGAGCAAGTGGGCGATATCGAAGCCGGTCCCACTGAGTATGAAGATGGAAAAATCAGGACCCTTCGAATTTGAGACAGAGTCAGGGACATCATGGGTGGCTGACCTCAAAGAACCCTCTTCTGCACCCGTGGTGGTGTTTGAAAAACCACTCATGAACCTCACCTTCGTGGACCTCCTGGCTGCCACGTCACACTTCGGCAAAGACTCTCTCCTTGCTGAGGGCAGGTGTGGGCCCGTCTACCGAGCTGTCCTACCCGGAGACATCCACGTGGCAATTAAAGTCCTAGAAAACGCCAGATACGTCCATCATCATGACGCTGTCGCTCTCTTCCTTCACCTCTCCCAACTCAAACATCCCAATCTCTTGCCCCTCTCCGGTTACTGTATTGCAGGCAAGGAGAAGCTGGTATTGTGCGAGTTTATGGCAAACGGAGATTTAGGTAGGTGGTTGCAGGAGCTACCAACAGGGGAGACTAATGTGGAGGATTGGAGTGGTGACACGTGGGAGATCATTCAAAACGGCGGCGTTTCTCGAGCGGAAAAGATGGGGTGGCCAATACGGCACCGTATTGCGGTGGGCGTGGCGCGTGGGTTGGCCTTTCTGCACCACGCGGGGTCGAGGCCCGTCGTGCACGGCCATTTGGTGACGTCAAACGTGCTTCTCGGAGACGACTTGGAGCCGCGGATCGCGGATTTCGGGTTCCGGAAGTTGGGGAGAGAGAGCGCGGCGGCGAATTGTTGGACAGAGACGGACGTTTACTGTTTTGGTGTGGTGCTAATGGAGCTGGTGACGGGAAGGGAGGGCACGGCGGAGACGGTGGTTTGGGTGAGGAAGGCGGTGAGGGAGGGTGATGCGGTGAAGGCGTTGGATGAGAGGCTGAAACTCGGTGGCGGGGACTCGGAGAGTGAGATGGTGGAGACCCTCCGAGTGGCCTATTTGTGCACGGCGGAGTCCCCAGGGAAGAGGCCCAGCATGCAGCAGGTGTTGGGGCTTCTCAAAGACATCCATCCCGACTGACTGACTACTCGCTTCACTCGCCCAACTCAATTCACCATCACCTCGTTGCTTGCCACCTGGCACTGCCTTTTTGGCCCGTCTTTAAAAATGTTATGTATATACAAAAGGAGACGAAGAAGCAATAGAGTGGAGAGTGTTGTTTAATGTCAAGTATCTTTTTGGTGTCCAGCATGCTGCATAGGC 2202 0.5123 MKSFCTFFILLALLLLVDSQSSSKDEDQELMSKAFQFVSGFNSSWFQTAQIQEINLSSKNLSGNISWKYLRNMSKLEALDLSGNFLHGQVPNWFWRSSTLLVVNLSNNRLGGSINPISQNPSSFSPLQNLNLSNNRFTNQLHLSAFSNLKSLDLSHNNLVALPSGFQNLSNLRHLDLSNCNIKGNIKSISSLTSLSYLDLSNNTLNGSFPSDFPPLKNIKFLNISRNNFKASTTLDRFKKFGKWAFIHAGQNFNYNYNASKTPTLHSSPPQPEHIHIQADKKKKKRPREKQKSKHRTRSMIAALSCASALVVVAMCMCVGWCCRRKRQLAKRSKWAISKPVPLSMKMEKSGPFEFETESGTSWVADLKEPSSAPVVVFEKPLMNLTFVDLLAATSHFGKDSLLAEGRCGPVYRAVLPGDIHVAIKVLENARYVHHHDAVALFLHLSQLKHPNLLPLSGYCIAGKEKLVLCEFMANGDLGRWLQELPTGETNVEDWSGDTWEIIQNGGVSRAEKMGWPIRHRIAVGVARGLAFLHHAGSRPVVHGHLVTSNVLLGDDLEPRIADFGFRKLGRESAAANCWTETDVYCFGVVLMELVTGREGTAETVVWVRKAVREGDAVKALDERLKLGGGDSESEMVETLRVAYLCTAESPGKRPSMQQVLGLLKDIHPD 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02189 670 SUPERFAMILY L domain-like 43 232 - -
Pste2g02189 670 MobiDBLite consensus disorder prediction 279 296 - -
Pste2g02189 670 Gene3D Ribonuclease Inhibitor 124 258 IPR032675 -
Pste2g02189 670 SUPERFAMILY Protein kinase-like (PK-like) 375 664 IPR011009 -
Pste2g02189 670 PRINTS Leucine-rich repeat signature 149 162 - -
Pste2g02189 670 PRINTS Leucine-rich repeat signature 192 205 - -
Pste2g02189 670 Gene3D Transferase(Phosphotransferase) domain 1 473 576 - -
Pste2g02189 670 MobiDBLite consensus disorder prediction 261 296 - -
Pste2g02189 670 Pfam Leucine Rich Repeat 75 94 IPR001611 GO:0005515
Pste2g02189 670 ProSiteProfiles Protein kinase domain profile. 397 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02189 670 SMART LRR_typ_2 146 168 IPR003591 -
Pste2g02189 670 SMART LRR_typ_2 73 96 IPR003591 -
Pste2g02189 670 SMART LRR_typ_2 169 196 IPR003591 -
Pste2g02189 670 Pfam Protein tyrosine and serine/threonine kinase 401 569 IPR001245 GO:0004672|GO:0006468
Pste2g02189 670 Gene3D Transferase(Phosphotransferase) domain 1 577 668 - -
Pste2g02189 670 FunFam Putative LRR receptor-like serine/threonine-protein kinase 358 472 - -
Pste2g02189 670 Pfam Leucine rich repeat 127 182 IPR001611 GO:0005515
Pste2g02189 670 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Pste2g02189 670 Gene3D Ribonuclease Inhibitor 20 123 IPR032675 -
Pste2g02189 670 FunFam Calmodulin-binding receptor kinase CaMRLK 125 235 - -
Pste2g02189 670 Gene3D Phosphorylase Kinase; domain 1 357 472 - -
Pste2g02189 670 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Pste2g02189 670 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 34 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02189 Pste-Chr2 21890266 21892605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02189 53 667 Receptor kinase-like Gene Family AT5G07280 31.467 2.73e-75 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Pste2g02189 PK_Tyr_Ser-Thr 9.1e-20 CL0016