Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02180 ACATAAAACTCCAGCTTTGGAAACAAACAACAAAGGAAGTCAATTGGTTGGAGGGGAAAAGCCGTGCTATGCATCAACAAATAGAGATGTCAGAAGGGTATGAGATTCCAAACAATGAGGAAACTTCATGGGGATGTTCCGAGAAATGCTCTTCATTTGACTTGAATGCAGAAGCTTGCATTGATACAGAAATGGAGTGCTATGAGCTCACAACAACTACTACTACTACGGAGAATGAGAAAACAAAGGATGAGGAGACTTCAGCAAGTGGAAGTAACACATCAGGAGAAGGAAATGAAAGAAGAGGAACAGTGAGACAACACGTTAGATCCAAGATGCCTCGCCTTCGGTGGACTCCTCAGCTTCATCATTCATTTGTGCATGCTGTTGAAGGACTTGGTGGTCAACACAGAGCAACACCCAAGTTGGTGCTTCAACTAATGAATGTGCGTGGACTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAGCTTGACGAGGCTGGGCAAGTGCTGAGGCAAACGCACAGGTCAAACCAAGAAGAAGGTCGTAGCTCTCTGATAATCCATCAGTCTGTGAGTTCTCATCAGCATCTTAAGATGGGGAATGGTGGAATTATTCTGGCAAGTAATTTCAATAAACATAGTCATTTACCAAGTCTCCTGCAGCCCTCTTTCTCCCTATCACGTTCACATGCAAACCAAACCGATTCACGATTATACGACGAACCTGGCAACAATTCTAAAAGTTTAAAGCTAGAATTTGATCCTCCATTTTGGATTAAGAGAGACGATCAACAATTGTCTGATTTGCAACTGGGTTTGACTCATACAGTTGGAAACGATGGTGGCAGGATGGATCAT 878 0.4317 MHQQIEMSEGYEIPNNEETSWGCSEKCSSFDLNAEACIDTEMECYELTTTTTTTENEKTKDEETSASGSNTSGEGNERRGTVRQHVRSKMPRLRWTPQLHHSFVHAVEGLGGQHRATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLRQTHRSNQEEGRSSLIIHQSVSSHQHLKMGNGGIILASNFNKHSHLPSLLQPSFSLSRSHANQTDSRLYDEPGNNSKSLKLEFDPPFWIKRDDQQLSDLQLGLTHTVGNDGGRMDH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02180 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 147 IPR017930 -
Pste2g02180 270 FunFam Myb family transcription factor 89 147 - -
Pste2g02180 270 MobiDBLite consensus disorder prediction 51 88 - -
Pste2g02180 270 Gene3D - 90 147 - -
Pste2g02180 270 Pfam Myb-like DNA-binding domain 93 143 IPR001005 -
Pste2g02180 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 67 176 IPR046955 GO:0003700
Pste2g02180 270 SUPERFAMILY Homeodomain-like 89 145 IPR009057 -
Pste2g02180 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 91 146 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02180 Pste-Chr2 21753502 21757061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02180 82 152 G2-like Transcription Factor Family AT2G42660 73.239 1.55e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste2g02180 Myb_DNA-binding 4.6e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02180 2 21753502 21757061 Pste2g02180 2 21753502 21757061 ECH
Pste2g02180 2 21753502 21757061 Pste3g03002 3 22824718 22825745 ECH
Pste3g03002 3 22824718 22825745 Pste2g02180 2 21753502 21757061 PCT