Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02164 GAAAATAATAATTGGGTGTTTCCGATAGTAGTAGTTGTATCGGTCAAGCCGAGCCGATCCGATGACGCGAGCCACTCACACACTGGGGGTTCCCCCAACAACACGCGCCCCTCCCCGGCGACCGTACCGTATTATCCCCCACCCTTCCCACTCTTTCGCCTTGCCGTTTCGCTTTCTCTCTCTTCTTTCTCTTTCCTCTTTTCCCTTTCTCTCTTCAACCCTAATTTCCGATGCCGGACTTCCACGACTCCCTCGCGCCGCCGCCGTCTCGCCCCGTCCCCGTCCGCGAGGACTGCTGGTCCGAGGACGCTTCCGCCACCCTCGTTGACGCCTGGGGCCGCCGCTACCTCGAGCTCAACCGCGGCAACCTCCGTCAGAAGGACTGGCAGGACGTCGCCGACACTGTCAACGCCCTCCACGGCCACACCAAGAAGACCCACCGCACCGACGTCCAGTGCAAAAACCGCATCGACACCATTAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCTCTTCCAACGGTTCTCTCTCTTCCCCTTGGCCTTTCTTCGAACGATTGGATGCTCTTATTGGCCCTAATTTTAACGCTAAGAAATCCACCTCTTCGCCTTCCCCTTCTCCGCCGGTTGCTCTTCCGCTGCTGCCCCATCGGAAGAATCTTTCCTCTTCTCCTGCTATTGCTGTACCGCCGACTGCTGTCGCCCTGCCCCAGAAGCGCTCGGCTGCCGCCGCGATGGACGAGGGTTACTTCAGGAGGAATTACTCCGCCATGGCTGCTGCGGCGGCTGCGGCTGAGGCCGATGAGGATGAGGAGGAAGAGGAGGAGGAGGAGGCGGAGGATGTGGAAGAGGAGGAAGAGGATGAAGATGAAGGGAGGGGGAGCGAAGTGGAGGAAGGGGAAAAGGAGAGGGAAGGGATGAGGAGGTTGGCGAAGGCAATAGAGAGGTTTGGGGAAGTGTATGAGAGAGTGGAGGGGCAGAAGCTCAGGCAGATGGTGGATTTGGAGAAACAGAGGATGCAGTTTGCTAAAGATCTTGAAGTGCAGAGGATGCAGATGTTTATGGATACACAGGTTCAGCTTGAGAGAATTAAGCGCGGTAAACGATCTGGCTCTAACGTGTGCTCTCTAGTTATTTGTACATGCCATCTGCGATCACCAGATATAGGGGATGGTGGAGTCTGGCAGGAAGCTGCATCTATCATGTGCACTGTTCAAATATGTATAGCTAGCCAAGTGGGCGATGGTTCGATGACGGTGCTGGAAAGGCAGTCTTGCTTTGGTCTAGTCTTGGGAAAGTACATATCTTCAGCTGATATACTGTCATGAGGGAATATCTCCAATGGGAATTTATTTTGGAGTAATTTTGGATTCTTTTAGCTAGCCTTTAATTGGTTGTTATTAGTCCTTATAAATTATTAATTCAGCAACTGTACTAGGCCTAATTCAGCTCCGATATAGAATTTGCTCCAATGTATAATACTCTTATGCCAAATGTGATCCTTTGTTCCTTTTCAATGCTTG 1526 0.5236 MPDFHDSLAPPPSRPVPVREDCWSEDASATLVDAWGRRYLELNRGNLRQKDWQDVADTVNALHGHTKKTHRTDVQCKNRIDTIKKKYKIEKARVSSSNGSLSSPWPFFERLDALIGPNFNAKKSTSSPSPSPPVALPLLPHRKNLSSSPAIAVPPTAVALPQKRSAAAAMDEGYFRRNYSAMAAAAAAAEADEDEEEEEEEEAEDVEEEEEDEDEGRGSEVEEGEKEREGMRRLAKAIERFGEVYERVEGQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKRSGSNVCSLVICTCHLRSPDIGDGGVWQEAASIMCTVQICIASQVGDGSMTVLERQSCFGLVLGKYISSADILS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02164 366 MobiDBLite consensus disorder prediction 119 141 - -
Pste2g02164 366 FunFam trihelix transcription factor ASIL2 23 89 - -
Pste2g02164 366 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g02164 366 MobiDBLite consensus disorder prediction 1 17 - -
Pste2g02164 366 MobiDBLite consensus disorder prediction 185 230 - -
Pste2g02164 366 Coils Coil 181 216 - -
Pste2g02164 366 Pfam Myb/SANT-like DNA-binding domain 20 114 IPR044822 -
Pste2g02164 366 Gene3D - 23 89 - -
Pste2g02164 366 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 292 IPR044823 -
Pste2g02164 366 MobiDBLite consensus disorder prediction 189 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02164 Pste-Chr2 21644575 21650838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02164 19 296 Trihelix Transcription Factor Family AT3G14180 34.286 1.32e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste2g02164 Myb_DNA-bind_4 3.4e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02164 2 21644575 21650838 Pste2g02164 2 21644575 21650838 ECH