Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02152 ATGGAGCCGGAAGGCAAAGAGTGTAGTCAGGAAATGGCGGAGGAATCTGAAGGGATAAAGCTGTTTGGGGCAATGATTAGAGTGAAGAGTGGGGAAGGAAATGAAGGAGAAAAGGAGAAGAGAGGGGAGAAGATAATAGCGTGTCCGAGATGCAAGAGCATGGAAACTAAATTCTGTTACTTTAATAACTACAACGTGAATCAGCCAAGGCATTTTTGCAAGAGCTGCCAGAGGTACTGGACGGCTGGTGGGGCCCTCCGAAAGGTGGCAGTGGGTGCCGGGCGGCGGAAGGTGAAGTCGGCGTGTCATGGTCATGGGGCTGAAGCTCATGAAACCTCCCAAGTTGACAACAAGTTTGAGATCGAACACAGGTTGCGTTTGGATGTTTCCATGCCTCACTCCGATTTCCGCCAGCTTTTTCTGCCCAAGCGCCCCCGTATCCCCTCTGCCTCAGGTCATCCTCCTCTTCTATCTCTTTACTTCAACTCCCTCATTAACCCCATTACTTATATATGCTCATCTTCATGTCTCTGA 534 0.4981 MEPEGKECSQEMAEESEGIKLFGAMIRVKSGEGNEGEKEKRGEKIIACPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRKVAVGAGRRKVKSACHGHGAEAHETSQVDNKFEIEHRLRLDVSMPHSDFRQLFLPKRPRIPSASGHPPLLSLYFNSLINPITYICSSSCL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02152 177 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Pste2g02152 177 PANTHER CYCLIC DOF FACTOR 2 17 107 IPR045174 GO:0003700|GO:0006355
Pste2g02152 177 Pfam Dof domain, zinc finger 44 100 IPR003851 GO:0003677|GO:0006355
Pste2g02152 177 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02152 Pste-Chr2 21550225 21550758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02152 13 146 C2C2-Dof Transcription Factor Family AT2G34140 47.826 2.90e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste2g02152 zf-Dof 4.3e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02152 2 21550225 21550758 Pste2g02152 2 21550225 21550758 ECH