LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g02099	GTTAAGTTCTGAGTTGGGACCTCACTTCTGAACTCTCTGAGTCTCTTAGATTATCATCAGGTTCAGGTGGCAATGGTGAAAATGAAACTACTAGCCCTGCTGGCAATGGCCATGATGCCATTCTATACACTTGCTCTTGAAGCTCATGCAGTGAGGCAAGTGGCCACAAACCATAACGTCTCTTGCATCCTAGTTTTCGGAGACTCCAGTGTTGATTCTGGCAACAACAATGTCCTTAACACCACAATGAAAAGCAACTTCCCTCCCTATGGGAAGGACTTCTTTCATAGCCGCCCAACTGGAAGGTTTAGTAATGGCAGGCTTGCCACCGACTTCGTTGCCGAAGCAGTGGGGTACAGAAAAGTGATTCCTCCTTTTCTTGACCCAAATTTGAAGGCAGAGGATCTGCCATATGGGGTTAGTTTTGCATCAGCGGCCACAGGTTTTGATGACTATACTGCTGAAGTTTCGGTACATTCTATGACCTTTGATAAATTATTTGCAATTAATGTATATTTGAATGATTTTGTGATGCATATGATTGGATGCAACGCACAGAATGTTTTGCCTGTTTCGAAACAGCTGGAGTATTTTGAGCATTATAAAATTCACTTGAGGAAAGTGGTTGGTGAAGAAAGGGCAGAGTTCATTACAAGAAATGCCTTGTATATTATGAGTATAGGTACAAATGACTTTCTGCAGAATTATTTCTTGGAACCTACTCGCCCTAAGCAATTCAGCTTGCAACAATTTCAGAATTTCTTGCTCTCCCGCGTCTACAAGGACGTTCAGGAAATGCATAGACTGGGGGCCAGGAGGTTGATCGTTGTAGGGGTCCTACCTCTGGGATGCATTCCACTTATCAAGACTATTAGGAACGTCCAAGGCTGTGATAAAACTTTAAACACTGTTGCTTACTCATTCAATGCCAAATTATCACACCAATTGGACAACTTAAAGACAAAACTGGGCTTAAAGGCTGCTTTTGTTGATGTTTATGGTATGATCCAACGTGCCGTCACCAACCCCAAAAAATATGGATTTATGGAAGGTTCAAAAGGATGTGTTGGGACAGGGACAATAGAATTTGGGGATTCATGCAAAGGGATGAATACATGTTCAAATCCAGACAAATATGTATTCTGGGATGCTGTTCATCCAACGCAGAAGATGTACCAGATAATAGCTGATGAGGCCATTGAATCTTTTATCAAGGATTTCTTTTGATAGCACCACCAAATTAACCTACATTGCATTATGCCATTTGCCAAAACTTCTTTTGTATCTATACGGAAAAAGATTCCACGTAGTTCCAAATAAACTGTAGGATTTCAATCCGTTACTTCTGCTATTGAATATATTTCTTATTTGATAAGATACTTCAAAGGATAAGATATTTTTGTTTTAAAACTAATGAACTATATTACAGATTTCGTGGTCTAAACCAATTTTAATGTGACAAGTCTTTTCAGTCTTTTTAATATACAAGAAAAAATTAACACTGGATTAGGTGTTTAATAAAGATTAACTGGGATGACAATGATGATAAAACACCGAATTAATTTTTCTAGGGTGGGCAGGAAAATTACTTTCATGCGAAGCCAAGAAATGAGATAAGATTATTGTTCTTC	1631	0.3893	MVKMKLLALLAMAMMPFYTLALEAHAVRQVATNHNVSCILVFGDSSVDSGNNNVLNTTMKSNFPPYGKDFFHSRPTGRFSNGRLATDFVAEAVGYRKVIPPFLDPNLKAEDLPYGVSFASAATGFDDYTAEVSVHSMTFDKLFAINVYLNDFVMHMIGCNAQNVLPVSKQLEYFEHYKIHLRKVVGEERAEFITRNALYIMSIGTNDFLQNYFLEPTRPKQFSLQQFQNFLLSRVYKDVQEMHRLGARRLIVVGVLPLGCIPLIKTIRNVQGCDKTLNTVAYSFNAKLSHQLDNLKTKLGLKAAFVDVYGMIQRAVTNPKKYGFMEGSKGCVGTGTIEFGDSCKGMNTCSNPDKYVFWDAVHPTQKMYQIIADEAIESFIKDFF	384

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g02099	384	SUPERFAMILY	SGNH hydrolase	197	377	-	-
	Pste2g02099	384	Pfam	GDSL-like Lipase/Acylhydrolase	39	374	IPR001087	GO:0016788
	Pste2g02099	384	CDD	SGNH_plant_lipase_like	38	376	IPR035669	-
	Pste2g02099	384	PANTHER	GDSL ESTERASE/LIPASE EXL3	162	374	-	-
	Pste2g02099	384	Gene3D	SGNH hydrolase	23	381	IPR036514	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g02099	Pste-Chr2	21096011	21101935	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g02099	22	377	Pollen Coat Proteome	AT1G75910	31.492	2.79e-55	183