Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02096 ATGGGAAGCCAGGAAGAAGGCAGATTTGTATTTCCACAAACACAAACAGAGCTATTGCCCTTCAACGAGAACGACCCCCAGGACATGGTCATATACCATGTACTCAACGAAGCCAATTCTCTCACCCCTCACCCTCACCCTCAATTTCAAACCCCCCTAGACCCCATCAGAACCATAGCCAAGAAGCACTACAGAGGTGTTCGCCGCCGCCCATGGGGCAAGTACGCCGCTGAGATTCGCGACTCCTCCCGCCACGGCGCCAGAATATGGCTCGGCACCTTCCAAACCGCCGAAGAGGCTGCCATGGCTTACGACCGAGCCGCCTTCAACATGAGAGGCGCCAAGGCTTTGCTCAATTTCCCTGCCCAGATTCTTGCTTTCAACAACAATCCCCATGACTCCTCCTCTGCCTCACCTAAATAG 423 0.5437 MGSQEEGRFVFPQTQTELLPFNENDPQDMVIYHVLNEANSLTPHPHPQFQTPLDPIRTIAKKHYRGVRRRPWGKYAAEIRDSSRHGARIWLGTFQTAEEAAMAYDRAAFNMRGAKALLNFPAQILAFNNNPHDSSSASPK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02096 140 Gene3D AP2/ERF domain 62 123 IPR036955 GO:0003700|GO:0006355
Pste2g02096 140 SUPERFAMILY DNA-binding domain 63 122 IPR016177 GO:0003677
Pste2g02096 140 ProSiteProfiles AP2/ERF domain profile. 63 121 IPR001471 GO:0003700|GO:0006355
Pste2g02096 140 Pfam AP2 domain 63 113 IPR001471 GO:0003700|GO:0006355
Pste2g02096 140 SMART rav1_2 63 127 IPR001471 GO:0003700|GO:0006355
Pste2g02096 140 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Pste2g02096 140 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Pste2g02096 140 PANTHER DNA-BINDING DOMAIN 50 130 IPR044808 GO:0003700|GO:0009873
Pste2g02096 140 FunFam Ethylene-responsive transcription factor 2 62 122 - -
Pste2g02096 140 CDD AP2 62 123 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02096 Pste-Chr2 21072456 21072878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02096 19 123 AP2-EREBP Transcription Factor Family AT3G23240 53.774 2.73e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g02096 AP2 1.1e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02096 2 21072456 21072878 Pste2g02096 2 21072456 21072878 ECH