Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02093 GTGGCTTCAGAGGTGAATATGCATCATCGATGTCTTGCACCACAACCTCTTTATTAATCTCCTTTGCCGTTGCGTTGGAACAGGATGATGCATCGGCAGCGGAGGATCAAGGGGCCATAGATCGCGTTGCTCCCGATCGCCTTAGCTACCTTAATGTATCAACTTATGGACTGATCTCAACCCTTATCATTCAACCTTTTTGCTGCTTTGAGCTTGAGGCTAAAGTATGGCTGCCAACGCTGTCGTTTAACCTTGTCACGCGCCGATCAGAGCACAAACCAAGGAGAGAAAGCATAATTGAAAAAAAACAAAAAAACAGAACCCTAACGCCTATTGGTTTCGCAATAGTAGCAGAACTGGAATCCTGTATATGCGCAGTTACTGATTCGTCGATGGTAGCCGTCGAAGAAAATCACATGGAAAGGGAACGAACCCGCAAACGCCCTCGTCTCGCGTGGGACGTTGCTCCTCCATCAGCGCCCGAGGCGCAACGGGCTCTGCCGGCCCCCGGCGAAGAAGGATTCGAAAGAAAGCACGTTTCGCCTCCGAAAAGGGACGACGATCGAGAGGGCCATTATGTCTTCAATCTCGGCGAAAATCTCACTCCTAGATATAAAATCCTCAGCAAGATGGGTGAAGGCACATTTGGTCGAGTTTTGGAATGTTGGGACCGCCAAACCAGAGAATATGTGGCTATCAAGGTAGTTAGAAGCATAAGGAAATATCGTGATGCAGCTATGCTAGAGGTTGATGTGCTTCAACATCTAGCCAAGAATGATAGAGGAAGCTCGCGATGTGTGCAGATCCGAAATTGGTTTGATTACCGAAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGGGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGAATATGTAAAGCTCCCTAGCCATAAGAGGGTTTCCTCAGATGAAATGCAATTCAGGTGCTTGCCCAAGTCTAGTGCTATTAAGGTGATTGATTTTGGTAGTACTGCATATGATAATCAGAATCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGATTATTCTAGGTCTAGGTTGGTCATATCCTTGTGATATGTGGAGTGTTGGATGTATTCTCATCGAATTATGCTCGGGTGAAGCATTATTTCAGACTCATGAAAACTTAGAGCACCTGGCAATGATGGAGAGAGTTTTGGGGCCTATTCCAGAGCACATGATTCGCAGGTCTAACAAGGGTGCAGAAAAGTATTTCAAGCGAGGAACGCGACTCAGATGGCCTGAAGGAGCAGTTTCAAGGGAGAGCATTAGTGCAGTAAAGAAGCTTGGTCATCTTAAGGATATTGTAATACGTAATGTGGAGTCTTCAAGGTCCTCCTTAACTGACTTATTACATGGCTTATTAACATATGATCCCACCAAACGTCTAACGGCTCGCCAAGCTCTCGATCATCCATTCTTTAGGAATCCAACTTAAGACATACCAGATTTTCTTATGTTTTGGAATGACTTCCATATTAAAAGTTATTAAGTTGCACAGGCAATAGCTTTGAATGTATCTATTTATTTATTATTAATAGCAGTGCCTCAGTTGCGTTAAAAGTATATTTTAATTTTGTCATTGTGTTCATTTTGTTCAATTTTTAAATAAAAC 1781 0.4301 MSCTTTSLLISFAVALEQDDASAAEDQGAIDRVAPDRLSYLNVSTYGLISTLIIQPFCCFELEAKVWLPTLSFNLVTRRSEHKPRRESIIEKKQKNRTLTPIGFAIVAELESCICAVTDSSMVAVEENHMERERTRKRPRLAWDVAPPSAPEAQRALPAPGEEGFERKHVSPPKRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEVDVLQHLAKNDRGSSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSEYVKLPSHKRVSSDEMQFRCLPKSSAIKVIDFGSTAYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPEHMIRRSNKGAEKYFKRGTRLRWPEGAVSRESISAVKKLGHLKDIVIRNVESSRSSLTDLLHGLLTYDPTKRLTARQALDHPFFRNPT 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02093 524 Pfam Protein kinase domain 195 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02093 524 SUPERFAMILY Protein kinase-like (PK-like) 182 522 IPR011009 -
Pste2g02093 524 MobiDBLite consensus disorder prediction 161 181 - -
Pste2g02093 524 MobiDBLite consensus disorder prediction 147 181 - -
Pste2g02093 524 ProSiteProfiles Protein kinase domain profile. 195 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02093 524 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 133 522 - -
Pste2g02093 524 Gene3D Transferase(Phosphotransferase) domain 1 249 520 - -
Pste2g02093 524 SMART serkin_6 195 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02093 524 Gene3D Phosphorylase Kinase; domain 1 182 275 - -
Pste2g02093 524 FunFam Serine/threonine-protein kinase AFC2 182 275 - -
Pste2g02093 524 FunFam Serine/threonine-protein kinase AFC2 271 520 - -
Pste2g02093 524 CDD PKc_CLK 182 520 - -
Pste2g02093 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02093 Pste-Chr2 21066845 21073440 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02093 195 522 Core Cell Cycle Gene Families AT1G76540 25.364 5.67e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pste2g02093 Pkinase 2.4e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02093 2 21066845 21073440 Pste2g02093 2 21066845 21073440 ECH