Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02091 TGCCAACATCGGTGAGATGCACAGTTACTTACACAGGGGGTAGGGTAGGTGAAAAGCCTATATAAGAAGGCACGTTATGTTGGTCATGTGGGTTCAGTTCAGACCGAAAAGCAAGACCAACAAAAAGTGCTGCTTCTATAGATTATTTTTTCTCTTCTGGTTGGCCGTTTTTTGTATCTAACTTTCAGCTCAGTTCAGTAATTTCCCACCCTCATCTAGAGCATCATAGTCACCATCATCATCATGGCTTCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCTAAGCCCTGCAACCCTCACCCCCAATGGCAGCATGACATCAACTCCACCCTCATCTCTACTGGTTGCCACAGAAGCCCTTACACTTCAGGAGTAGGCTGTGAGGAGAGAAGTCCAGAGCCGAAGCCAAGGTGGAACCCAAAACCTGAACAAATTCGTATTCTGGAGGCCATATTCAACTCTGGAATGGTGAATCCTCCAAGGGATGAGATAAGGAAGATAAGGGCTCAGTTGCAAGAGTATGGTCAAGTGGGTGATGCCAATGTCTTCTATTGGTTCCAGAACCGAAAATCAAGAAGCAAGCACAAGCTTCGCCATCTTCAAAACTCAAAGAACACGAACCATGAAACCCAACAAAACCCCACATCTCTCCCTCAGATTACTGCATCAGCGTCCTCGTCTTCCTCGTCTGATAAATCTTCTCCAAAAGAAATAATACCAACCAAGGGTGTGTTCTCGATTGGATTCTCCAACGTCACCGCCGATGTGATGCCTAATTCTCCAACTGCTTGTGTGAAGCAGACCTATTTCCAGACCCACAATGCGTCCACTATGCTTCCACCGCCTTCTGCTGCACCAGTTGAGGCATTCTTCTTCCCAGTGCAACATCATGGGCAGGGAGTAGCTCCTAGTACGGTATCATCACAAGGGTTTTGCTTCTCCGAGCTGTCCAATGTTGTTCAAGTTCAAGCACATACTCAACATAGCGTTGGTCCTTGCACTAGCCTCTTGCTCAGCGAGATCGTAGGTCATGGTGCTGCTGCCTCAAAGAAAGATCTAGAACAAGACAAGTCTATGAAAATCATGCATCAGCCCCCACTGCTTAATTTCTGTGTCGCTCCCACAACAACTTCTTCTACTACTACCACTCTTGTACCTCCCATCACTACCCCCTCTTCTACTGTTCAATCCCCCGTCATGCCTCAGGTTCAAGGTATGGGAGATCCAGCAGCTGCGGCGAGATCAACGGTGTTCATTAACGATGTAGCTTTCGAGGTAGCGGTGGGACCTTTCAATGTGCGTGAAGCTTTTGGAGATGATGCTGTGCTCGTCCATGCCACTGGTCAACCTGTGCTAACAAATCAATGGGGCGTCACTCTTCATTCACTCCAGCATGGTGCATGTTATTATTTGGTGCGCACATATAGAAAGTAGAAAGCTGAATGATGATGAATGGGAGGTTTTAGATATGTTAGTTTTTCTGTCACTTTCAGTCTTTTGTTCTTTTTTAATCTATCTCTACGTTTGTATTACTATTAGGGTTATTTAATAGGAGTTTGTAGGCACTGCTTATGAGAATGACTTAAGATGG 1594 0.4573 MASSNRHWPSMFKSKPCNPHPQWQHDINSTLISTGCHRSPYTSGVGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSKNTNHETQQNPTSLPQITASASSSSSSDKSSPKEIIPTKGVFSIGFSNVTADVMPNSPTACVKQTYFQTHNASTMLPPPSAAPVEAFFFPVQHHGQGVAPSTVSSQGFCFSELSNVVQVQAHTQHSVGPCTSLLLSEIVGHGAAASKKDLEQDKSMKIMHQPPLLNFCVAPTTTSSTTTTLVPPITTPSSTVQSPVMPQVQGMGDPAAAARSTVFINDVAFEVAVGPFNVREAFGDDAVLVHATGQPVLTNQWGVTLHSLQHGACYYLVRTYRK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02091 397 SMART HOX_1 53 120 IPR001356 GO:0003677
Pste2g02091 397 CDD homeodomain 54 116 IPR001356 GO:0003677
Pste2g02091 397 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 393 IPR044557 GO:0003700|GO:0050793
Pste2g02091 397 MobiDBLite consensus disorder prediction 123 157 - -
Pste2g02091 397 Pfam Homeodomain 55 115 IPR001356 GO:0003677
Pste2g02091 397 SUPERFAMILY Homeodomain-like 51 119 IPR009057 -
Pste2g02091 397 Gene3D - 55 121 - -
Pste2g02091 397 MobiDBLite consensus disorder prediction 124 156 - -
Pste2g02091 397 ProSiteProfiles 'Homeobox' domain profile. 51 116 IPR001356 GO:0003677
Pste2g02091 397 FunFam WUSCHEL-related homeobox 11 55 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02091 Pste-Chr2 21036012 21038328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02091 1 392 Wox Gene Family AT5G45980 38.213 1.84e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste2g02091 Homeodomain 1.2e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02091 2 21036012 21038328 Pste2g02091 2 21036012 21038328 ECH