Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02086 TAAATCCATTCTAACCGTTGAAAATTACATGCAAAAGTCATTGACTAAGTAAGAGGTATTAGTTAGCTTTAGCCATCTTGAGGACGCGTCTGGTCTACCATCTTTTGTTGATTCAGTTTTGTCATACTATCAAGGCTTTTCTTTCTGTTAAAAGTTGATTGCTATCGATTGATCTATTTGATTATTTGGTGGTCATTCTTCTATCCTAAAGTTTCAAAATTCAATTTCTGATCCAACCTAAGAAAATATTGAGTAATGGACCAACAACATAAAGTGATCCTTCTGCTGGTACTTCTTTTCCAAGTTCTGCTTGTAACATCACAGACAGCATCACAGACAGACAATCGAGATTATTCTGGCCTAAGTTCTCTTACGCAATCCTGGAGTAACAGGCCACAAAATTGGGTGGGCACAGATCCTTGTGGCGGTGGATGGGACGGCATTCGTTGCAGCAATTCAAGAATAACCCAATTGAGACTACCAAATTTGGATTTGAGGGGCCAGCTGTCTTCGGCAATTCAGTCTTTATCTGAACTAGATACTCTTGATCTTTCTTACAACACTGGCTTGACAGGAACAATTCCACCTGAAATTGGGAATTTGAAAAAGCTAAAATCCCTATCATTGGTTGGTTGTGGTTTCTCTGGTCCTATTCCAGATTCAATAGGATCCTTAACGCAGCTGACCTTTCTAGCACTGAATTCTAATAGGTTCTCTGGAACTATACCACACTCTCTTGGCAATCTATCAAATGTTAATTGGCTTGATCTGGCTGAAAACGAGATTGAAGGGACTATTCCTGTCTCTGATGACCAAGGACGACCAGGACTCGACCTGCTCCTTAATGCACAACACTTTCATATGGGGAACAATAAGCTCACAGGGACAATCCCAGAAAAACTTTTTAACTCCAGTATGAAACTAGAACACGTGCTTTTCGACCATAATCAATTAGAGGGTAGTATTCCTAGATCTCTTAGTACCGTGAGCACATTGGAGGTTGTGCGCTTTGATCAGAATAGGCTAACTGGGGGAGTGCCTTCAAATATAAACAATCTCGGAAAACTAAGCGAGATCTATTTATCTCACAATCAGCTGAATGGCTCTCTGCCCGATTTTAATAGAATGAACAGTCTCACCTATGTGGACCTGAGCGACAACGGTTTCAATGATTCTAATATTCCTTCATGGGTTACAACTCTACCACAACTGACCACAGTGATACTTCAGAAGAACCAGCTAGGTGGCGCATTAAATCTTAGTGGCTACAGCAATAGTCTACAACTCATTAATTTGGAGGATAATGAAATAACAGAGCTTGACCCAGTAAATAACTTGCCAAATATTGAGCTAAGACTAGCTAACAACCCAATTTGTCGTGAAAGTGGAGCATCTGAAAACAGTTACTGCAAGCAACCAGTACGCAATCCCTCGTATTATTCAACACCACCAAATAATTGTTCACCTTCACCTTGCAGTTCCGATCATATTTCCAGCCCAAATTGTAAATGTGCATTTCCCTATACTGGACTTCTTATATCGAGAGCTGTTAGTTTCTCAAACTTCAGTAATGCAAGTTACTATAGGGAGATTGAGCAGACTTTGATGGATACTTTTCGAAACCAAAGCATTCCAGTGGATTCAGTTTCTCTTAGTGACCCCTCCAGGAATTCTACTTCTGATAATTTTGAATTGACCCTGCAAGTCTTCCCTTCTCTAACCGATCGTTTCAATGCAACTGGGGTTTTAACTATTGCTTTTCTGCTTAGCAACCAAATTTACAAACCCCCAGAATTCTTCATCCCTTACATCTTCAAGGGTGCTAACTATGATTTCTTCGGAGGAGAGCCAGAAGGATCAAAGTCATCATCAAATACAGGGGTTATAGTTGGTGCTGTAGTTGCTGTTGTGGTCTTTGTTGTACTAGCATTCCTTGCCGGGATGTATGCCATTCGCCAAAAACGAAGAGCAAAAAGATCTGCAGACTTGAACCCTTTTGCAAATTGGGAACAGAATAAGAATAGTGGTACTGCTCCTCAGTTGAAAGGAGCACGATGGTTTGCTTTTGATGACCTAAGGAAGTACACCAACAACTTCTCAGAATCCAATACTATTGGATCTGGAGGCTACGGAAAGGTTTATCAAGGAACTCTTCCCACTGGGGAGTTAGTTGCCATCAAACGGGCAGCCAAGGAGTCTATGCAGGGTGCTGTTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTCGTTAGTCTTGTTGGTTTCTGTTTTGAGAAGGGTGAACAAATGCTAGTGTATGAGTACATTCCAAATGGCACTTTAATGGACAGTCTTTCAGGAAAGTCTGGGATCTGGATGGACTGGATACGGAGGCTTAAAGTAGCATTAGGTGCTGCCAGGGGTCTAGCCTATCTTCATGAACTTGCTAACCCACCTATCATACACAGGGACATAAAATCAAGCAATATCCTACTTGATCATCACCTCAATGCAAAAGTTGCAGATTTTGGTCTCTCCAAACTCCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGATACTTGGATCCTGAATATTACATGACCCAACAGTTAACTGAAAAGAGTGATGTATATAGCTATGGAGTGCTAATGCTGGAACTAGTCACAGCAAGAAGGCCAATAGAGCAAGGAAAGTATATTGTAAGAGAGGTAATAAGGGTAATGGACACATCAAAAGATCTATACAACCTTCACTCTATTTTAGATCCAACCATAATGAAAACAACAAGACCAAAAGGGTTAGAAAAGTTTGTGATGCTGGCAATGAGGTGTGTTAAAGAATACGCAGCTGAGAGGCCTACAATGGCCGAGGTTGTAAAAGAGATTGAGAGCATAATAGAACTTGTAGGATTGAACCCCAATTCTGAATCAGCTACAACATCAGAAACTTACGAGGAAGCAGGTGGCGGAAATGTCCAACATCCTTACCGGGAAGAAGATTTTAGCTATAGTGGACTTTTTCCATCAACAAGGGTAGAACCCCAATAGGCTTTGGTATATTTTTCTCTTGTAATTCTTTTCCCTCTTCAGATGTTATGTCTGAGATTTTCATTATCAATTTTGGATTCAAACCCCTTATATAGGTTGTAGTTGAATTTTTACGTTGATTATTAGAAGGTTGTACTTATATATTTGTTCTTGACATGTAAAATGGTTTGTGAATCTTGAATTGGTGTAACATTTGAATGAATGTAAGTATTCATCGTTGAATTTTCA 3294 0.401 MDQQHKVILLLVLLFQVLLVTSQTASQTDNRDYSGLSSLTQSWSNRPQNWVGTDPCGGGWDGIRCSNSRITQLRLPNLDLRGQLSSAIQSLSELDTLDLSYNTGLTGTIPPEIGNLKKLKSLSLVGCGFSGPIPDSIGSLTQLTFLALNSNRFSGTIPHSLGNLSNVNWLDLAENEIEGTIPVSDDQGRPGLDLLLNAQHFHMGNNKLTGTIPEKLFNSSMKLEHVLFDHNQLEGSIPRSLSTVSTLEVVRFDQNRLTGGVPSNINNLGKLSEIYLSHNQLNGSLPDFNRMNSLTYVDLSDNGFNDSNIPSWVTTLPQLTTVILQKNQLGGALNLSGYSNSLQLINLEDNEITELDPVNNLPNIELRLANNPICRESGASENSYCKQPVRNPSYYSTPPNNCSPSPCSSDHISSPNCKCAFPYTGLLISRAVSFSNFSNASYYREIEQTLMDTFRNQSIPVDSVSLSDPSRNSTSDNFELTLQVFPSLTDRFNATGVLTIAFLLSNQIYKPPEFFIPYIFKGANYDFFGGEPEGSKSSSNTGVIVGAVVAVVVFVVLAFLAGMYAIRQKRRAKRSADLNPFANWEQNKNSGTAPQLKGARWFAFDDLRKYTNNFSESNTIGSGGYGKVYQGTLPTGELVAIKRAAKESMQGAVEFKTEIELLSRVHHKNLVSLVGFCFEKGEQMLVYEYIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGLAYLHELANPPIIHRDIKSSNILLDHHLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSYGVLMLELVTARRPIEQGKYIVREVIRVMDTSKDLYNLHSILDPTIMKTTRPKGLEKFVMLAMRCVKEYAAERPTMAEVVKEIESIIELVGLNPNSESATTSETYEEAGGGNVQHPYREEDFSYSGLFPSTRVEPQ 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02086 936 FunFam Leucine-rich repeat protein kinase family protein 188 287 - -
Pste2g02086 936 CDD STKc_IRAK 620 886 - -
Pste2g02086 936 ProSiteProfiles Protein kinase domain profile. 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02086 936 SUPERFAMILY Protein kinase-like (PK-like) 593 882 IPR011009 -
Pste2g02086 936 Gene3D Ribonuclease Inhibitor 285 388 IPR032675 -
Pste2g02086 936 Pfam Protein kinase domain 615 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02086 936 Gene3D Transferase(Phosphotransferase) domain 1 690 903 - -
Pste2g02086 936 Gene3D Ribonuclease Inhibitor 189 284 IPR032675 -
Pste2g02086 936 FunFam Leucine-rich repeat family protein 31 186 - -
Pste2g02086 936 SMART serkin_6 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02086 936 Gene3D Phosphorylase Kinase; domain 1 584 689 - -
Pste2g02086 936 ProSitePatterns Protein kinases ATP-binding region signature. 620 646 IPR017441 GO:0005524
Pste2g02086 936 Gene3D Ribonuclease Inhibitor 29 188 IPR032675 -
Pste2g02086 936 MobiDBLite consensus disorder prediction 897 916 - -
Pste2g02086 936 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 690 899 - -
Pste2g02086 936 PANTHER RECEPTOR-LIKE PROTEIN 55 40 886 - -
Pste2g02086 936 ProSiteProfiles Leucine-rich repeat profile. 341 362 IPR001611 GO:0005515
Pste2g02086 936 SUPERFAMILY L domain-like 43 379 - -
Pste2g02086 936 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Pste2g02086 936 FunFam Leucine-rich repeat protein kinase family protein 581 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02086 Pste-Chr2 21001735 21009802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02086 8 936 Receptor kinase-like Gene Family AT5G49760 52.720 0.0 933
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pste2g02086 Pkinase 3.8e-49 CL0016