Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02073 GAGGATTCTCCGTCAGAGAAAGAGACTGGAGGGTCGGATTCTCAAGTGGGAAGTAAACCACCGAGAGTTGATGCACATTCTCTTCCTATTTATACCCCTGAAGCTGCTACTCTCATTCCCTTTTCTCTCCCTATTCTCTCTCCTACTGTTAAGGCCGAAGCGTCCCGAGAATCTCCGACACCTTCGTCGGCGATGGCGACAACGGAGTCCGAACTCGATTACGATTTTCCGAATCTCGATTACGATCTTCGCTATCTCAGTCTCGCTGGAACCGATGCCTTCACCGCTTTCCAAAATCTATTATTACCGGATGCGATGCCTTCATTTTCAACTTTTGGACTTACAGACCCTCTTGGTTCCCAAACCCTAACTCCAAACCATTCCACCATTACTGCTACCATTGATTCTCAGTCATCCATTTGTGTCACTAGTAATGTTGGCAGTCCAATGTCAGCTAATAAACCAGAGGGCAGAGAGAGTCACACCAAAGGAGGCACGAGTGGTTCCTCTGAGCCGTCTGATGAGGATGATGAAACAGGTGCTTGTGAGCAGAGCACAAATCCAATTGATATTAAGCGCCTTAGAAGGATGGAATCTAATCGCAATTCTGCAAGAAACTCAAGAAGAAGAAAGCAAGCGCATTTGGCTGACCTTGAGTTGCAGGTTGCAAAACTGAAAGAGGAAAACGCAAACCTATGCACGCAGTTCACACATGCTAGGCAACATTTTCGTGAGGCAGATACGAATAACCGGGTGCTAAAATCAGATGTAGAAGCCTTGAGAGCCAAGGTGAAGTTAGCAGAGGATATGATGACTAGGAGCTCTTTCAGTACGTTAAACAATCAGCTTTTTCAAACACAAGGTCAAGTGAACACACCCCCACAACTGAACACGACTAATATGCGCCACATGGCGCATGTTTCGCCAACCATTACAGTCTATGGAAATGATGGTTCATATAATGGTGTCACAGTTGGTGGACAGAATTCAGCATTGGGAAACTTGGATATGAATTTCAACGACATCAACAATGGAGTCATGAGCGATGCTATGAGCTGTGGGAATATTTGGCCACTCGACCGGAGTCTGTAGCTTCCAACTTTATATTTACGTCTTGTCTAATTTTATTATTATAGTAGGCTATGCTAATGTCTTTGCATGATTTCCCTTTAATGATGCCTGTTTAAAATGGTGTCTTCTTTGGTTGTATTTAGTTTTTGTATAAAAGGACTTGAATGCTTATCCATTTCTCATTGTAATTGTATAAAAAACAAACTTCTCCCTTTTTCATATGAAATATCATCCAATAGACAACAAATTATATTCTGACA 1331 0.4275 EDSPSEKETGGSDSQVGSKPPRVDAHSLPIYTPEAATLIPFSLPILSPTVKAEASRESPTPSSAMATTESELDYDFPNLDYDLRYLSLAGTDAFTAFQNLLLPDAMPSFSTFGLTDPLGSQTLTPNHSTITATIDSQSSICVTSNVGSPMSANKPEGRESHTKGGTSGSSEPSDEDDETGACEQSTNPIDIKRLRRMESNRNSARNSRRRKQAHLADLELQVAKLKEENANLCTQFTHARQHFREADTNNRVLKSDVEALRAKVKLAEDMMTRSSFSTLNNQLFQTQGQVNTPPQLNTTNMRHMAHVSPTITVYGNDGSYNGVTVGGQNSALGNLDMNFNDINNGVMSDAMSCGNIWPLDRSL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02073 363 Coils Coil 250 270 - -
Pste2g02073 363 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 190 253 IPR004827 GO:0003700|GO:0006355
Pste2g02073 363 SMART brlzneu 188 252 IPR004827 GO:0003700|GO:0006355
Pste2g02073 363 Gene3D - 191 247 - -
Pste2g02073 363 MobiDBLite consensus disorder prediction 1 27 - -
Pste2g02073 363 MobiDBLite consensus disorder prediction 189 212 - -
Pste2g02073 363 Pfam bZIP transcription factor 191 235 IPR004827 GO:0003700|GO:0006355
Pste2g02073 363 MobiDBLite consensus disorder prediction 143 212 - -
Pste2g02073 363 PANTHER BASIC LEUCINE ZIPPER 63 117 345 - -
Pste2g02073 363 SUPERFAMILY Leucine zipper domain 191 243 IPR046347 GO:0003700|GO:0006355
Pste2g02073 363 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 195 210 IPR004827 GO:0003700|GO:0006355
Pste2g02073 363 FunFam BZIP transcription factor 190 241 - -
Pste2g02073 363 Coils Coil 208 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02073 Pste-Chr2 20919422 20932039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02073 135 358 bZIP Transcription Factor Family AT5G24800 48.485 8.16e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste2g02073 bZIP_1 7.5e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02073 2 20919422 20932039 Pste2g02073 2 20919422 20932039 ECH
Pste2g02073 2 20919422 20932039 Pste8g00300 8 1635315 1646870 PCT