Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02071 ATGGGCTTGATCGATCTCAACACCACCACCGAGAACGATGAAGCTCCATTATCTGCTGCTTCTTCATCCTCTTCCTCTTCTCACTCCGGGATAAGCATTTCGGCTTCAACCTCGCTGGTTCCTCCTCCCTCTCTCTGCCTCGACCTGTGGCACGCCTGTGCTGGCCCTTTGATCTCTCTGCCTAAGAAAGGAACTCTTGTTGTTTACTCGCCACAGGGACACTTCGACCATCTTCAGGATTTTCCTCTCACTGCCTATCATATTCCACCCCATGTGTTCTGTCGTGTTCTTGATGTAAAGCTCCATGCAGAGGAAGGAAGCGATGAAGTGTATTGCCAAGTGTTGTTGGTTCCTGAGAGTGAGCAAGTGGAGCAAGGTCTGCGCAAAGGGGAGATTGATGCTGATGTGGAAGAGGAGGACACTGAAGCAATCGTGAAGTCTACAACTCCCCATATGTTCTGCAAGACTCTCACAGCTTCAGACACCAGCACGCACGGAGGATTTTCTGTGCCTCGTCGTGCAGCTGAAGATTGTTTTCCTCCCCTGGATTACAGTCAACAGAGACCTTCTCAGGAGCTTGTGGCAAAGGATCTTCATGGTCTGGAGTGGAGGTTTCGACATATATACAGAGGCCAACCACGGAGGCATTTGCTCACAACTGGGTGGAGTGCATTTGTGAACAAAAAGAAGCTTGTTTCTGGAGATGCTGTGTTGTTTCTTAGGGGTGACGATGGAGAACTGAGATTAGGAATTCGTAGAGCAGCTCAGTTGAAAAGTGCTGGTTCCTTTGCAGTTCCCTCTGGTCAGCAATTGAATCCTGCAACTCTCATGGATGTTGTTAATGCTTTATCTACAAGATGTGCATTTAGTGTTTGCTACAATCCAAGGCTCAGCTCTTCAGAATTCATCATACCTGTTCACAAATTCTTGAAGAGCCTTGAGTATTCTTATTCAGTAGGAATGCGGTTCAAGATGCGTTTTGAAACTGAAGATTCTGCAGAGAGAAGATTCACTGGATTAATTGCTGGAATTAGTGATGTTGATCCTGTTAGATGGCCAGGATCGAAATGGAGATGCCTAATGGTAAGGTGGGATGATATAGAAGTTGCTAGGCACAATAGGGTTTCCCCATGGGAAATTGAACCAGCCGGTTGTGTTTCAAGTTCCAGTAACTTTATGGCAGCTGGTTTGAAGAGGACCAGGACTGGAATGACTTCGACAAAGCTGGAATATCCCACTCCCAATGGGATTGGAACATCAGACTTTGGGGAATCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTGCTAATAGTAATACTCCCTTTAACGGTGTTAATCCTGAGAGTCCCCAATTATACGAGTTAGGGGGGTGCTATCCTGGTTCAAACCGTTCTGGGATTCCTCCAACAGGAAATAACATCAGAATGCCGCATCCGGCATCTGATTTTTCCTGCAATGGCATAGGCTTTAGTGAATCTTTCCGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTCTTCCAAGCCAACCTTATGGAAGAGCCATGTCCATCGAGGAGGCTCAAGCAAATGGTCGCTTTGGACTTTATGATGGTTATCAGTTGCTTAACTCCAGAAATGGATGGTCTGCACAGATGCATGACAATGCTCCACATTTGCATGCATCTGTTACCCCTGTTCAAGTATCATCTCCATCATCTGTGTTAATGTTTCAGCAAGCAGTTTCAACCTGTGATTATAATAACAAACGTAATAAGGAAATAGAGGGTAGAGTCCATTACCGAGATCTATACACGTCTGAAGTGAAGGGTAGAACATTTGCATCCTCCCCATCTGATGATCTTATTTTCTCTAAGAAAGCCCTGGAAGGTACAAGTTCTTTAGGTATGTTTGATGTTCATAATCAGTTGACTAGTTCACGGCCACATGAATCAGTGTTAGCATTGAGAAGCAGTCAAGACTTGGTTTCCTCATGTAAGAGTAGTTGCAGACTCTTTGGTTTTTCATTGACCGAAGACACACATGTTGCAAATAAAGAGGCTGATGCCTCTACCATCACTGTACCATTGAATGTTGGACCTTCCTTTAGTAGACATGTTGAAGATGAGTTCCATCCTGGGCATTCACTCCCCAGTAAAGTGGTTGGAAGTAACTGTACTGAAGTAAGTGATCTATAA 2187 0.4495 MGLIDLNTTTENDEAPLSAASSSSSSSHSGISISASTSLVPPPSLCLDLWHACAGPLISLPKKGTLVVYSPQGHFDHLQDFPLTAYHIPPHVFCRVLDVKLHAEEGSDEVYCQVLLVPESEQVEQGLRKGEIDADVEEEDTEAIVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATLMDVVNALSTRCAFSVCYNPRLSSSEFIIPVHKFLKSLEYSYSVGMRFKMRFETEDSAERRFTGLIAGISDVDPVRWPGSKWRCLMVRWDDIEVARHNRVSPWEIEPAGCVSSSSNFMAAGLKRTRTGMTSTKLEYPTPNGIGTSDFGESLRFRKVLQGQEILGANSNTPFNGVNPESPQLYELGGCYPGSNRSGIPPTGNNIRMPHPASDFSCNGIGFSESFRFQKVLQGQEILPSQPYGRAMSIEEAQANGRFGLYDGYQLLNSRNGWSAQMHDNAPHLHASVTPVQVSSPSSVLMFQQAVSTCDYNNKRNKEIEGRVHYRDLYTSEVKGRTFASSPSDDLIFSKKALEGTSSLGMFDVHNQLTSSRPHESVLALRSSQDLVSSCKSSCRLFGFSLTEDTHVANKEADASTITVPLNVGPSFSRHVEDEFHPGHSLPSKVVGSNCTEVSDL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02071 728 Gene3D - 151 255 IPR015300 -
Pste2g02071 728 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Pste2g02071 728 CDD B3_DNA 151 253 IPR003340 GO:0003677
Pste2g02071 728 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Pste2g02071 728 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 44 681 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste2g02071 728 FunFam Auxin response factor 316 387 - -
Pste2g02071 728 FunFam Auxin response factor 151 255 - -
Pste2g02071 728 SMART B3_2 153 255 IPR003340 GO:0003677
Pste2g02071 728 SUPERFAMILY DNA-binding pseudobarrel domain 146 260 IPR015300 -
Pste2g02071 728 MobiDBLite consensus disorder prediction 1 28 - -
Pste2g02071 728 Gene3D - 316 390 - -
Pste2g02071 728 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02071 Pste-Chr2 20903320 20908013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02071 152 512 B3 DNA Binding Superfamily AT2G33860 58.564 2.13e-144 428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pste2g02071 B3 3.5e-22 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02071 2 20903320 20908013 Pste2g02071 2 20903320 20908013 ECH