Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02066 TATCCTCTTTTTTTTTCTCTCTCTCTCTTCCTGAAAAAGAACCAGCTAGTTAAGAAACCAGACACAGTTCAATCGTCGAATCATAGCTTAGAGAAGACACGGAGAAAGGAAACAGAAAGCCTGGGTGCTGATACTATAGAAGAGTGGAAGAAAAAGGGTTGTGCTTTGAGATATATGTGCATGTACATGTGCAAAGGAAATTAATTAACACAAAGATGACATGGTGCAATGACTCTGATAAGGAGAGGGGCATTGAATCAATCACGCCAACTATGACAATTACTCCTAACACTGATGACACCCAACAAATTAAATCCATGACATGCCCCTCGTGCGGCCATACCTTCGAATTCAAAGATCAGGGTGGAATTGATGACTTGCCAGGGTTACCAGCTGGAGTGAAGTTTGACCCGAATGACCAAGAAATACTGGAGCATTTAGAGGCAAAAGTGGCGTCTGATGCATGCAAGCTTCATCCCCTTATTGATGAGTTTATACCAACGCTTGAAGGCGAGAATGGTATCTGTTATACCCACCCAGAAAAGCTACCAGGAGTTAGCAGAGATGGACAGATCCGCCATTTCTTTCACAGGCCTTCAAAAGCTTACACAACTGGGACAAGGAAAAGAAGAAAGGTTCACACTGATGAAGAAGGAAGTGAAACAAGGTGGCACAAAACGGGAAAAACTAGAGCAGTTTTTGCAGCTGGTGGTGCAATAAAAGGATTTAAAAAAATACTAGTACTCTATACCAACTATGGCAGGCAAAAGAAGCCCGAGAAGACTAATTGGGTGATGCATCAATACCATCTTGGCAGTAGTGAAGAAGAGAAAGATGGGGAATTAGTTGTCTCAAAGGTCTTCTACCAGACACAACCTAGACAAAGTGGTAATCCTATTATCATAAAGGATCCGTACCCAAAAATGTTGAGTGATGCAAGTGGATCAATACCTCAAACGGCAACTCTTGTGGATTGCTACAATGTTCCTTACATAAATTATGATCATGCCCATATGAGTCATAATAGGGAAAGCTCCACACAACTAATTATTCCTAGCTCGGTTGTCCAAGTTGATGGCTCTAATTATATTCGCTTAGGAATGGATGCAAAGAAAGCAAGAGTTGAAAGTAACAGTGAGAAGAGCTTCTAGGTAGAGCAGTAGTGAAATCCCATTACCAATTGAATAACAGTGTATTTATATGCATGTTGGGTTAGAATAGTTGGCTTCCTTATTGAGATACATATGGTGCATGCATGGTGGACTTTTCATTAATTCACCCTGGTTAGGAAGTTAAGAGACATATTTAAGGTATATATTTTTATGCGGTACTATTGTTTGATTTTAATTTTAGGGTACATGTATAATAGTAAAATGTGTTTAGAGATATTACAATAGTAGTAGGGTTATTGACTTATTGTTATTGAGACGTCTCTCCCAAATTCCATCCATATATGTTTGTCG 1463 0.3951 MTWCNDSDKERGIESITPTMTITPNTDDTQQIKSMTCPSCGHTFEFKDQGGIDDLPGLPAGVKFDPNDQEILEHLEAKVASDACKLHPLIDEFIPTLEGENGICYTHPEKLPGVSRDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRAVFAAGGAIKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSSEEEKDGELVVSKVFYQTQPRQSGNPIIIKDPYPKMLSDASGSIPQTATLVDCYNVPYINYDHAHMSHNRESSTQLIIPSSVVQVDGSNYIRLGMDAKKARVESNSEKSF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02066 311 Gene3D NAC domain 67 222 IPR036093 GO:0003677|GO:0006355
Pste2g02066 311 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 25 235 IPR044799 GO:0003700
Pste2g02066 311 FunFam NAC domain-containing protein 73 67 222 - -
Pste2g02066 311 ProSiteProfiles NAC domain profile. 58 218 IPR003441 GO:0003677|GO:0006355
Pste2g02066 311 SUPERFAMILY NAC domain 54 218 IPR036093 GO:0003677|GO:0006355
Pste2g02066 311 Pfam No apical meristem (NAM) protein 59 199 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02066 Pste-Chr2 20842488 20846554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02066 1 228 NAC Transcription Factor Family AT4G28500 72.174 5.05e-121 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste2g02066 NAM 2.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02066 2 20842488 20846554 Pste2g02066 2 20842488 20846554 ECH