Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02061 GGTAGAAGAGTTATAGTAGTCAAGAAGAGCAACTGTTGTTGTTGGTTTATTATTTTTGTTTATCAATTATCACTCTTTTATTACTATTGTTTTATTATTTGTCTTGGATTTTGTTCTTTTATTCTTCATCTTCGATGTTCTTTCTTTTCAATCTCTTATTACACGCTGCTTTTCTTTTTATCTTTTGAATTTAAATTATCTTGTTGCTATTTATTTATTTTTTCATCAAAGGATAATAATTCTGTGCCTTTCCATTCCTTGACTATCACGGAATTTTTTGATTTCCAAAGAGAAAAAGAGATGACAAAAATAAATAAAAACAAAGAAACACCAAAATTGATTCTATTTGGTTGCCCTAATTATTTTTTCCCTTTCCTCTCTGTGCTGGGTTTGAAGGAGGAAAGAGTTTCGATCTCGATGGAGGCCGAGCCAGAGAATAACGAAGTAAAGAGGGAAGGCAACAGCAATGAGAACAACAACATCAACAATGAAAGTAACAGCAAAATCGGAAATTCGAGTGAGGGTCAGAGCAAGCCCAAGCGTCAGATGAAGACGCCATTTCAGCTTGAAACTCTGGAGAAAGCTTATGCAGTTGAGAATTACCCCTCCGAGGCGATGAGGGCGGACTTGTCGGAGAAGTTGGGGTTGTCGGATCGGCAGTTGCAGATGTGGTTCTGTCACCGGCGGTTGAAAGACAAGAAGGACTTGCCCTCAAAAAAGCCGCGTAAGGCGGTGGCGTTGCCGGATTCTCCGCCTGAGGAGACTAAGTTGGGTCCCGAAGCAGGAACCGAATACGGATCCGGGTCGGGTTCAGGGTCCAGCCCATTTACCCGTTCTGAGTTGAGGAATGTGGTGCCTCGGGGGTATTATGAGTCGCCACAGACTATAATGGAACTTAGAGCAATTGCTTGTGTGGAGGCTCAGTTGGGGGAGCCTTTGAGGGAAGATGGGCCTATTCTTGGAGTGGAGTTTGATCCATTGCCGCCAGATGCATTTGGGGCACCCTTAGCTGTTGCGGAACAGCAGAAGCGGCCTAGTCTTGCCTATGAAAGTAAAATATATGAAAGACACGATGTTAGGACAAATAAGGCAATAGCTAGGACATTCCATGAATACCATTTTCTTCCAAACCCGCCTAGCATTAGATCTGATGTTTATGGACAACTGAACCTACCTCATTTACATGATCCAATGGAGGGTCCTACCAGAACTCCTTTCCCCCTTGGAAATGAACAGCAACCCAGGATTCATGCTCCCCAAAGTCATTCTTCCCGTGTTCGCCTTATGTCTCAACCGCAGGAAAAGCAAGTGATTCCCTATCCATCTCCTCCTCGAGACAATGATGTTGTAACAAAAAGGGAACCTCACATGAACATAACCAATCCTGGAATTAACTCCAACTTTACTGATCACCCAATTGTTAATCAGGAACCTTATGCTTTACCTAGTGGACAAGTTTCCAATAACGATGCAGTATTGAGGATGGAGAAGAAACGAAAGAGTGATGAAGCCAGAGTTGCAAAGGAAGTTGAAGCCTATGAAATGAGGATGCGAAAAGAGCTTGAGAAGCAAGATAACCTCAGACGGAAGAGTGAAGAGCGTTTGAGGAAAGAAATGGAAAGACAGGATCGTGAAAGAAAGAAGGAAGAAGAGAGGTTGATGCGTGAGAAACAGCGAGAAGAGGAAAGATCTAGGCGTGAGCAAAGACGGGAAATGGAACGAAGGGAAAAGTTTTTGTTGAAAGAACATTTAAGAGCTGAGAAAAGGAGGCAAAAAGAAGAGATTCGCAAAGAGAAAGAGGAAGAGAGGAGGAAAGCTGCCCTTGAGAAGGCAAATGCTCGGAGAATAGCTAAAGAATCTATGGAGCTTATCGAGGATGAACAACTAGAATTGATGGAGTTGGCGGCTGCAAGCAAAGGGCTTTCCTCTATTATTCATATTGATCTTGATACTTTGCAAAACCTTGAATCATTTAGAGATTCATTGTGTGTATTTCCCCCCAAAAGTGTAAAGCTGACAAAACCATTTGCTATCCAACCCTGGATCAACTCAGAACAGAATATTGGCAACCTCTTTATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGATTTATGGCCCTTTACTCTTGATGAGTTTATACAGGCATTTCATGACTATGATTCTAGATTGTTGGGTGAGATACATGTTGCTATTCTCAAGGCGTATGCATGGGGCTTTGACATTCGAAATTGGCAGAAGAACTTGAATCAATTGACATGGCCAGAAATTTTCAGACAGTTAGCACTGTCTGCAGGATTAGGACCGCAGTTGAAGAAAAGAAGTGTTACATGGTCATATGCAGTTGATAAAGATGAGGGGAAAAGTTGCGAAGATATTATTTCTACACTTCGTAATGGTTCAGCAGCTGAAAGTGCTGTAGCCAAAATGCAAGAGAGAGGTCTGTTAGCTCCTCGAAGATCAAGGCATCGGTTAACTCCTGGAACAGTTAAATTTGCAGCTTTTCATGTTCTCTCATTGGAGGGTAGTAAGGGATTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACCAGTAAGACGCCTGAAGCATCAATTTCTGTTGCTTTGACTAGAGACACTAAATTGTTTGAAAGAATAGCTCCATCAACATATTGTGTGCGAGATGCATTCAGAAAGAATCCTGCTGATGCTGACTCCATTCTTTCAGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGATGCTGATGATGTTGAAAGAGAAGAGGAGTCAGAAAGTGACGAGGTTGATGAGGATCCTGAAGATGATGATTTAGTAAATCCTTCAGGAGCAAACCAAAATTCTGAACAGTATGATGACACAAACATTTGCTCATCAAATGGAAAAGAAAATCTGGGTCATGATGTAGATCTTATTCAAAATGAATTTGATACAGATCTACCTTGTTTTCCTAAGAATGGTTCCAAGGATGCTGATTGTCCCAGTTCTGGCACCAGACAATCTGTTGCATGTGAAGATTTAAATGCTGGCAATCTTGATCAAGATAATATGGAAATCGATGAAAGCAAATCTGGAGAATCCTGGATTCTAGGGCTTTCTGAAGGAGAATATTCTGATCTCAGCGTTGAAGAGCGTCTAAATGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGGCTGGAATCAGCAAATGCTCTGAAGAAACAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGCCTGAAAGATGATAATATTAGTAAATTAGATTTTCCATCACTTGCTGGTAATAAAATTGAAACGTCATACACTTATCCAGCTGTTGAGGGAAACCAAAGCCCAATGCTTGACATAAATATCAGCAATTTTAATAATGAAGCATCGCCTGGCACTGCAGAAAACCAAAAAGGAACTCCTGTAGCACAGACTCAGAGCATGCCTATGGAGAAGTCCTCATCAATTCAAGATTTTGGCACAGGTACTGGTGCAGACATCCCTCAGACTCAGGTACCCGCACAATATTCAAAAAGATCGCGATCACAGTTGAAATCTTATATTGCCCACCTAGCAGAGGAGATGTATGTCTACAGGTCTTTACCCCTCGGCCAAGATCGCAGACGTAATCGATATTGGCAGTTTGTTGCTTCTGCTTCTAGCAATGATCCTGGTTCTGGCAGGATCTTTATTGAATATCATGATGGCAAGTGGAGGCTTATTGATTCTGAAGAGGCTTTTGATGCTCTTTTGACATCATTGGATTCACGTGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAAGATTGAAAATTCCTTTAAAGAAAATGTTCGAAAGAGGAATGCATGTTGTGCAAAAAATGGAAGCAGAAGCGAAGTTTCTATTGAAGTTGAAGCTAATGAAACATGTTCTATCCCTGACCACAATGCTGGATTTGACAGTCCTAGCAGTACCCTTCATGACTTGAACACTGATACATCTGAAACGTCATCATCCTTCAAAATTGAGCTTGGGAAAACTGAGAGTGAGAGGCAAGCTTCCTTGAGAAAGTATCAAGATTTCCAGAAGTGGTTGTGGAAAGAATGCTACAATTCGTCGGTTTTATGTGCTTTGAAATATGGGATAAAGAGATGCAAACCTCAGATGGACGTTTGTGATATCTGTCTCAATCTTTATTTTGTTGAAGATTCTCATTGCAATTCCTGCCACCGGACTTTTCCCTCAAATAATGGATTTAATTTTTCTAAGCATGCATTTCAATGTCGAGACAAGTTATCCAAAGATAATTGTATTTTGGAATATTCTCTTCCCTTGCGGTCAAGATTGCTTAAGGTATCGGTTCTGTCTGAAGCATTTGAAACAAATTGGACCAATGATATTAGGAAGCACTGGGGCATGAAGTTGAGCAAATCATCTTCTGTTGAGGAACTTATACAGATATTAACCCTATTTGAGAGATCACTACGGCGAGATTTTCTGTCATCAAACTTCTCTACAACAGATGAATTGTTGGGATTAAGCAGTGTGTCAGAAAGTTCTGTGCAGGCTTCAACTGATCCTGAATCTGTTGCTGTGCTTCCATGGGTTCCACTAACAACTGCAGCTTTGTCTCTCAGGCTTTTTGAGATTGATTCATCCATCAGCTATGTAAAGCTTGAAAGACGTGAGCCTTGTGAGGAGAAAGAAAAGCTTCCATCAAGATATACTCACATGAAACCTAATAGGGAGGTTGAACCGGCGGAATTTGTCCATGATGAATTCACTAAAGTTAAATGTGTTCCTAAGAAAATTGTACGAAGTAGCACTAAACGTGGTCGAGGGACCAATGAACAAGGACGGGGTAAAAAGCCTGCTAAAAGAGTTTGCAACTCCAAACGAGATGGTGGTCGCAAGAATGCTAAGGTCACTGACAATCTAAGTCACAAATTAAAACAGCAGGCACGAGGAACACAAGGGCAAGGTGCTGGGCGAGGGCGCCGAACAGTGAGGAAGCGAAGAGTGGGAAAGAGAGCTGTTGAAGATTTGTTGCTTAGCCATAGGACAGCCAGTCATAGCTCCAAGATTGATAGAGAACCTTTGAGAAACATGGATGATGAGTGGGATGGAGAAAAGGGGAGTCCCATGACTCCAGTACACATTGGGGTTGCTGCTGACAATAGTAATAGTGCTGAAGAGGTGGAATCTGATGATGACAATGCTCAAGCTGTGGAATATGATCAAGGAAACTGGGAGGTAGGTTTTAATGGTGTTCCCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGTGACGAAGATGTGGATGCTTTTGAAGATGATAATGACAATGGCATTGAAGAGAATGAAGAGGAGGATTCAGAGGCAGATGTTATGAGTGAGGGTTCAGATGGGATGGCAAATAGGATACTTTACAAGCACCTGAGCTCCAAGTCATCTCGTGGCTTGAAGAGTTTT 5532 0.4156 GRRVIVVKKSNCCCWFIIFVYQLSLFYYYCFIICLGFCSFILHLRCSFFSISYYTLLFFLSFEFKLSCCYLFIFSSKDNNSVPFHSLTITEFFDFQREKEMTKINKNKETPKLILFGCPNYFFPFLSVLGLKEERVSISMEAEPENNEVKREGNSNENNNINNESNSKIGNSSEGQSKPKRQMKTPFQLETLEKAYAVENYPSEAMRADLSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPRKAVALPDSPPEETKLGPEAGTEYGSGSGSGSSPFTRSELRNVVPRGYYESPQTIMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPLAVAEQQKRPSLAYESKIYERHDVRTNKAIARTFHEYHFLPNPPSIRSDVYGQLNLPHLHDPMEGPTRTPFPLGNEQQPRIHAPQSHSSRVRLMSQPQEKQVIPYPSPPRDNDVVTKREPHMNITNPGINSNFTDHPIVNQEPYALPSGQVSNNDAVLRMEKKRKSDEARVAKEVEAYEMRMRKELEKQDNLRRKSEERLRKEMERQDRERKKEEERLMREKQREEERSRREQRREMERREKFLLKEHLRAEKRRQKEEIRKEKEEERRKAALEKANARRIAKESMELIEDEQLELMELAAASKGLSSIIHIDLDTLQNLESFRDSLCVFPPKSVKLTKPFAIQPWINSEQNIGNLFMVWRFLITFADVLDLWPFTLDEFIQAFHDYDSRLLGEIHVAILKAYAWGFDIRNWQKNLNQLTWPEIFRQLALSAGLGPQLKKRSVTWSYAVDKDEGKSCEDIISTLRNGSAAESAVAKMQERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDTKLFERIAPSTYCVRDAFRKNPADADSILSEARKKIQIFENGFLAGEDADDVEREEESESDEVDEDPEDDDLVNPSGANQNSEQYDDTNICSSNGKENLGHDVDLIQNEFDTDLPCFPKNGSKDADCPSSGTRQSVACEDLNAGNLDQDNMEIDESKSGESWILGLSEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLESANALKKQMWAEAQIDKVRLKDDNISKLDFPSLAGNKIETSYTYPAVEGNQSPMLDINISNFNNEASPGTAENQKGTPVAQTQSMPMEKSSSIQDFGTGTGADIPQTQVPAQYSKRSRSQLKSYIAHLAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFIEYHDGKWRLIDSEEAFDALLTSLDSRGIRESHLRLMLQKIENSFKENVRKRNACCAKNGSRSEVSIEVEANETCSIPDHNAGFDSPSSTLHDLNTDTSETSSSFKIELGKTESERQASLRKYQDFQKWLWKECYNSSVLCALKYGIKRCKPQMDVCDICLNLYFVEDSHCNSCHRTFPSNNGFNFSKHAFQCRDKLSKDNCILEYSLPLRSRLLKVSVLSEAFETNWTNDIRKHWGMKLSKSSSVEELIQILTLFERSLRRDFLSSNFSTTDELLGLSSVSESSVQASTDPESVAVLPWVPLTTAALSLRLFEIDSSISYVKLERREPCEEKEKLPSRYTHMKPNREVEPAEFVHDEFTKVKCVPKKIVRSSTKRGRGTNEQGRGKKPAKRVCNSKRDGGRKNAKVTDNLSHKLKQQARGTQGQGAGRGRRTVRKRRVGKRAVEDLLLSHRTASHSSKIDREPLRNMDDEWDGEKGSPMTPVHIGVAADNSNSAEEVESDDDNAQAVEYDQGNWEVGFNGVPPNRWNRDLVGMSDEDVDAFEDDNDNGIEENEEEDSEADVMSEGSDGMANRILYKHLSSKSSRGLKSF 1844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02061 1844 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1223 1295 IPR028941 -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 1791 1817 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 235 279 - -
Pste2g02061 1844 Pfam Homeodomain 178 234 IPR001356 GO:0003677
Pste2g02061 1844 ProSiteProfiles DDT domain profile. 685 744 IPR018501 -
Pste2g02061 1844 Coils Coil 510 616 - -
Pste2g02061 1844 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 152 736 IPR044977 GO:0006357
Pste2g02061 1844 Pfam DDT domain 687 737 IPR018501 -
Pste2g02061 1844 CDD homeodomain 180 234 IPR001356 GO:0003677
Pste2g02061 1844 Gene3D - 162 236 - -
Pste2g02061 1844 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1040 1083 IPR028942 -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 1624 1697 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 524 571 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 1791 1823 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 1151 1180 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 235 249 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 1632 1664 - -
Pste2g02061 1844 Pfam HB1, ASXL, restriction endonuclease HTH domain 830 898 IPR007759 GO:0006355
Pste2g02061 1844 SMART HOX_1 177 239 IPR001356 GO:0003677
Pste2g02061 1844 ProSiteProfiles HARE-type HTH domain profile. 830 899 IPR007759 GO:0006355
Pste2g02061 1844 MobiDBLite consensus disorder prediction 928 978 - -
Pste2g02061 1844 ProSiteProfiles 'Homeobox' domain profile. 175 235 IPR001356 GO:0003677
Pste2g02061 1844 SMART testlast3 685 745 IPR018501 -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 931 954 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 153 182 - -
Pste2g02061 1844 SUPERFAMILY Homeodomain-like 167 234 IPR009057 -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 956 978 - -
Pste2g02061 1844 MobiDBLite consensus disorder prediction 142 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02061 Pste-Chr2 20780290 20795964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02061 171 1774 Homeobox Transcription Factor Family AT1G28420 47.038 0.0 1234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pste2g02061 WSD 7.4e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02061 2 20780290 20795964 Pste2g02061 2 20780290 20795964 ECH
Pste3g03908 3 32225434 32236638 Pste2g02061 2 20780290 20795964 PCT