Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02057 AAGAGAAGAGTAAAAGCAAGTAGGAAATATATGGGGATGGACTATTATGGGATTTTGGAGGTTGACAAGAATGCCACAGATGAAGAATTGAAGAGAGCCTACAGAAAACTTGCAATGAAATGGCACCCTGACAAGAATCCAAACAACAAGAAAGAGGCTGAGATTAAATTCAAACAGATATCTGAAGCCTACGAGGTTCTAAGTGATCCCCAGAAGAGAGCAATTTATGATCGGTATGGAGAAGGTGGCTTCAAAGGTGGAATGCCAACTCCAGATGAAGGTGTGGCTTCCTTCTTCCGAACTGGGGATGGCCCAAATGCATTTGGGTTCAATCCCAGGAATGCAAACAACATTTTTGCAGAAGTGTTTGGGTGTTCAAGCCCATTTGGAGGAATAGGAATGGGAACTGGGTTTAGCTGTGGTGGTAGAGGCAGAGGCAGAGGCAGAGGCATGGGCATGGGCATGGGCATGAGGGGTGGATCGTGGGTGTCAAGGTCCTTTGGTGGAATGTTTGGCAGTGACATGTTTGGGGAAGGCAGACCAATGAATCAAGGTCCACGCCGAAAAGCACATCCCATTGAAAATACCTTGCTTTGCAGCCTTGAGGAGCTCTACAAGGGGAGTACCAGAAAGATGAAAATCTCAAGGGAAATTACACATGCAAGCGGGAGAACTTTTCCTGTGGAGGAAATATTAAACATTGAAATTCAACCAGGCTGGAAAAGGGGAACAAAAATCACTTTCCAAGAGAGAGGAAATGAGCAGCCAAATGTTATTGCAGCAGATCTTGTGTTTATTATTGATGAAAAACCTCACAGTATATTTACAAGAGATGGTAATGATTTGGTTGTGACACAAAAGATATCACTTACAGAAGCTGAAGCTCTAACAGGCTACACCATCCGAATTACAACTCTAGATGGCAGGGATCTGAGCATCGCCATAAACAATGTGAGTGATCAAGATTATGAAGAAGTGATCACTGGGGAAGGTATGCCAATTTCCAAAGATCCTTCAAAGAAGGGTAATCTTAGGATCAAATTCAACATTGAAATCCCGGACGTAGTTGCTGCCTGA 1077 0.4364 KRRVKASRKYMGMDYYGILEVDKNATDEELKRAYRKLAMKWHPDKNPNNKKEAEIKFKQISEAYEVLSDPQKRAIYDRYGEGGFKGGMPTPDEGVASFFRTGDGPNAFGFNPRNANNIFAEVFGCSSPFGGIGMGTGFSCGGRGRGRGRGMGMGMGMRGGSWVSRSFGGMFGSDMFGEGRPMNQGPRRKAHPIENTLLCSLEELYKGSTRKMKISREITHASGRTFPVEEILNIEIQPGWKRGTKITFQERGNEQPNVIAADLVFIIDEKPHSIFTRDGNDLVVTQKISLTEAEALTGYTIRITTLDGRDLSIAINNVSDQDYEEVITGEGMPISKDPSKKGNLRIKFNIEIPDVVAA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02057 358 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 283 IPR008971 GO:0006457|GO:0051082
Pste2g02057 358 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 13 354 - -
Pste2g02057 358 SMART dnaj_3 13 72 IPR001623 -
Pste2g02057 358 Gene3D - 192 270 - -
Pste2g02057 358 Pfam DnaJ domain 14 77 IPR001623 -
Pste2g02057 358 PRINTS DnaJ domain signature 72 91 IPR001623 -
Pste2g02057 358 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pste2g02057 358 PRINTS DnaJ domain signature 16 34 IPR001623 -
Pste2g02057 358 PRINTS DnaJ domain signature 34 49 IPR001623 -
Pste2g02057 358 Gene3D - 272 354 - -
Pste2g02057 358 FunFam Dnaj homolog subfamily b member 189 270 - -
Pste2g02057 358 SUPERFAMILY HSP40/DnaJ peptide-binding domain 275 354 IPR008971 GO:0006457|GO:0051082
Pste2g02057 358 SUPERFAMILY Chaperone J-domain 13 110 IPR036869 -
Pste2g02057 358 ProSiteProfiles dnaJ domain profile. 14 80 IPR001623 -
Pste2g02057 358 FunFam DnaJ subfamily B member 13 272 354 - -
Pste2g02057 358 CDD DnaJ_C 193 354 - -
Pste2g02057 358 Pfam DnaJ C terminal domain 194 353 IPR002939 -
Pste2g02057 358 FunFam DnaJ subfamily B member 13 13 133 - -
Pste2g02057 358 Gene3D DnaJ domain 12 131 IPR036869 -
Pste2g02057 358 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pste2g02057 358 CDD DnaJ 14 69 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02057 Pste-Chr2 20754706 20757810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02057 15 79 C2H2 Transcription Factor Family AT1G74250 39.130 1.45e-09 57.8