Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02037 ATGATGGCGTCTTCATCTTCGGCCTCGCGGGAGGGACACTACAGAGGGGTGAGGAAGCGACCATGGGGACGCTACGCAGCGGAAATAAGAGACCCGTGGAAGAAGACACGTGTGTGGCTGGGGACATTCGATACTCCGGAGGAGGCAGCTCTGGCCTACGACGGGGCAGCAAGGTCCCTCAGGGGGGCAAAGGCAAAGACAAACTTCCCTCCGCCGGCGCCACTATGCCTGGACCTAAACGTCCCCTCCTCAGATACACGCTGCTGGCCCACTCGCTCTAGAAGCATGGTCCTCACCGACTTCCTCCACACCGCCGTTCTCAAAGATATCCAAACGCCGCCTCCACCCGCTCCCGTTCCCCCCGCAGTTGATCTGGTCCAGACTTCCCACACGCCCTCCCTTCTCGGACTCGTCAACCGCGGCATCCCCATCGACCTCAACGAACCTCCCCCCTTGTGGCTATGA 465 0.6129 MMASSSSASREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGAKAKTNFPPPAPLCLDLNVPSSDTRCWPTRSRSMVLTDFLHTAVLKDIQTPPPPAPVPPAVDLVQTSHTPSLLGLVNRGIPIDLNEPPPLWL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02037 154 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Pste2g02037 154 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 9 90 - -
Pste2g02037 154 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Pste2g02037 154 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Pste2g02037 154 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Pste2g02037 154 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Pste2g02037 154 FunFam Ethylene-responsive transcription factor 2 13 71 - -
Pste2g02037 154 CDD AP2 13 70 IPR001471 GO:0003700|GO:0006355
Pste2g02037 154 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
Pste2g02037 154 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02037 Pste-Chr2 20605786 20606250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02037 4 154 AP2-EREBP Transcription Factor Family AT1G28360 48.691 1.32e-46 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste2g02037 AP2 2.1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02037 2 20605786 20606250 Pste2g02037 2 20605786 20606250 ECH