Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02035 ATGTGGCTGCCTAAGTATCAGTCAGAGAAGAAGGATGGCGTGAATGGATTAGTAGCAGTGGCAATTGATAAAGAAAAAGGGAGTCAAAATGCATTGAAATGGGCCGTTGACAATCTCCTCAGCAGAAGTGCAACTGTAATTCTCATACACATCAAGCTTCTTGCTCCTTCTCTATCTCCATCACCTTCTCTTTTCACCCCAAAGATAAGTGCTTTCCTTGGTGATGAAAGTTCAGTGGTATGCAAAGATACTACAAGCCACAGCAAAAATGTTTTCCTTCCATATCGTGTCTTCTGTACACGGAAAGATATACAATGCAAGGACGTCCTACTAGAAGATTCAGATATACCAAAAGCTCTAATTGAATATGTTTCTCAGACAGGCATTGAGCATCTGGTTCTTGGCTCTTCGACAAAAACTAGTTTGCTCAAAAGATTCAAGGTATCGGATATTCCTGGCACTGTTTCAAAAGGGGTGCCAGATTTCTGTACAGTCTATGTTATTGCTAAAGGAAAGATTCAATCAATGCGATCTGCTTCTCGTCCTGCCCCGGCTACGGTTTCTAGCTTGTTTAGTCAAGCTAGTGTCAGGTCAGACCATTCAGATCCAACTCAAAGCATAAAAGATCAAGAAGTTCATTCCTTTGATTCTGCACCACCGAGTGCATCGCATGATGAAACAGAACCATTCAGTTCACCATTCACTAGGAAAGGTTACAATGGAAGACTTTATGCGGACACTCACAAGTCAGATATGGACATTTCCTATGTAAGCTCTGGAAGGCCAAGCACGGAATACATGTTCCCTTCATTGAACTCAGATACAGGACTGTCCAACCCTCGGCTATCATATAGCTCAGACATAGATGCAAACTTAAGCTTTGACTCAATTCCTTACGGAATGAAGTCTATGGATATAGGCACTCCTCCAGAATTCTCATCTCTCTCGTTTGATAGTGACAGGCATTCCTCTTCTACTTCACAAGCTCTGCGGTGGAAAATAGAGGAAGAGAGGAAACTGGAAGAGGCAAGGCAGGCTGAGGAAGCAGCACTGGCAATTGCAGAAAAGGAGAAAGCCAAGTCTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAACTGGAAGCACAGAAGAGACTCAATGCAGAAATGAAAGCGCTTAAAGAAGCAGAGGAGAAAAAAAGAGTGCTTGATGCTTTGGTAAATGTAGATGTCAGGTATAGAAGGTACACTATTGAGGAGATTGAAGCTGCAACAGAATATTTTGCAGAATCCCGAAAAATTGGAGAAGGGGGATATGGTCCAGTTTTTAAATGCCATTTGGATCACACAGCTGTTGCAGTCAAGGTTCTACGCCCAGATGCACAGCAAGGAAGATCTCAGTTTCAACGAGAGGTTGAGGTGTTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCATGTCCAGAATACGGGTGTCTAGTGTATGAGTACATGGCAAATGGAAGCTTAGATGATTGCCTCTTTCAACGAGGTAACACTCCACCACTTTCTTGGCAGCGAAGGTTCAAAATAGCCGCTGAAATAGGCACAGGCTTGTTGTTCCTGCACCAGACAAAACCAGAACCTCTGGTGCACAGAGACTTGAAACCAGGCAACATCTTGCTAGACAAAAACTATGTGGCCAAAATCAGCGACGTAGGTTTAGCCAGGCTAGTTCCACCGTCTGTAGCAGACAGTGTCACGCAATATCGCATGACATCCACAGCAGGAACCTTCTGCTACATAGATCCTGAGTACCAGCAGACAGGTATGTTAGGGGTGAAATCAGACATATACTCCCTTGGGATCATTTTTTTGCAAATTTTGACCGCAAAATCACCAATGGGTTTGGCCCATCATGTTGAAAGGGCCATTGAGAAGGGAACTTTTGTTGGGATGTTGGATCCATCAGTCCATGATTGGCCAGTAGAAGATGCCTTGAAGTTTGCTAAGATGGCATTGAAGTGTTCTGAACTGAGGCGCAAAGACAGACCTGATCTTGGCAAGGTTATCCTGCCAGAACTCAACAGGCTAAGAGACCTTGCTGAAGATCATCATTTAATTTCAGTTATGGCTGATTCTTTGGATGCTCCCCTTGAGAGACAAGTTTCTGTGCAGTTG 2160 0.4403 MWLPKYQSEKKDGVNGLVAVAIDKEKGSQNALKWAVDNLLSRSATVILIHIKLLAPSLSPSPSLFTPKISAFLGDESSVVCKDTTSHSKNVFLPYRVFCTRKDIQCKDVLLEDSDIPKALIEYVSQTGIEHLVLGSSTKTSLLKRFKVSDIPGTVSKGVPDFCTVYVIAKGKIQSMRSASRPAPATVSSLFSQASVRSDHSDPTQSIKDQEVHSFDSAPPSASHDETEPFSSPFTRKGYNGRLYADTHKSDMDISYVSSGRPSTEYMFPSLNSDTGLSNPRLSYSSDIDANLSFDSIPYGMKSMDIGTPPEFSSLSFDSDRHSSSTSQALRWKIEEERKLEEARQAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKEAEEKKRVLDALVNVDVRYRRYTIEEIEAATEYFAESRKIGEGGYGPVFKCHLDHTAVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFQRGNTPPLSWQRRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPGNILLDKNYVAKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTAKSPMGLAHHVERAIEKGTFVGMLDPSVHDWPVEDALKFAKMALKCSELRRKDRPDLGKVILPELNRLRDLAEDHHLISVMADSLDAPLERQVSVQL 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02035 720 SUPERFAMILY Protein kinase-like (PK-like) 408 683 IPR011009 -
Pste2g02035 720 MobiDBLite consensus disorder prediction 191 235 - -
Pste2g02035 720 MobiDBLite consensus disorder prediction 210 229 - -
Pste2g02035 720 ProSiteProfiles Protein kinase domain profile. 425 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02035 720 Gene3D HUPs 17 168 IPR014729 -
Pste2g02035 720 Coils Coil 337 403 - -
Pste2g02035 720 CDD STK_N 17 171 - -
Pste2g02035 720 ProSitePatterns Serine/Threonine protein kinases active-site signature. 543 555 IPR008271 GO:0004672|GO:0006468
Pste2g02035 720 Gene3D Transferase(Phosphotransferase) domain 1 498 706 - -
Pste2g02035 720 Pfam Universal stress protein family 18 145 IPR006016 -
Pste2g02035 720 Pfam Protein kinase domain 426 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02035 720 Gene3D Phosphorylase Kinase; domain 1 389 497 - -
Pste2g02035 720 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 397 497 - -
Pste2g02035 720 PANTHER OS02G0152300 PROTEIN 18 706 - -
Pste2g02035 720 FunFam U-box domain-containing protein 51 498 698 - -
Pste2g02035 720 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 146 - -
Pste2g02035 720 SMART serkin_6 425 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02035 Pste-Chr2 20593974 20598359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02035 1 697 Receptor kinase-like Gene Family AT1G78940 53.280 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste2g02035 Pkinase 2.9e-40 CL0016