Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02033 GGATTCTCATTCCGTTAACCTCTCTCTCTGCGCTTCCAAATTCAATCCAATGTCTCACCCTGATTCTCCGGTTGCCGAAGATGTCGACCTCGATCCATCGCTTGAAGAAGAGGAAGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGATAAAGAAGAAGGAGGAGTAGAAATAGAGGAGGTTGAGGTCGTGGAAGAGGTCGAAGAGGAAGAGGTCGAAGAGGAAGAGGTAGAAGAGGAAGTAGAAGAGGAAGAGGAAGTAGAGGAGGAAGAGGAAGTAGAGGAGGAAGAGGTTGAAGAAGAAGAGGAAGAGGTCGAGGATGAAACCGAAGGGGAAGAGGAAGTAGAAGAGATAGAGGTAGAGGAGGAGGAAGAGGAAGAGGAAGAGGGACAGCAAGCAGTAGTAGAAGAAGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGTCGAAGAAGACGGGGAGGGGGAGAAGGAGGAGGAGGAAGAAGAACAACAACAGCAAAAAGCAGTGGAGGAGAAGAAGGAAAAGCAACAGCAAGAAGAAGAAACAGTGGAGGAGAAAGCGGAGCAACTAAAACAACAACAACAACAACAGCAAGCAGTGGAGGAGGACAAAACGGCGGTTCCAGATTCTCCACCCAATGCCGATGGGAAAGATTCACTCCAACATATGGAGTCTGAGGAGCAAGTTGAAAACCTGGGACCAGTTTCTTCTCTGGCTGAAAACCCTGAAGTAATGCCTCATTCTAGTGTACATTGCGTGGAAGAGAATGATGCCATGCTCAAAACGTCTGTTCCTTCATGTGAGATACTAACATTGAAAAAGGAAGAGCTTCCCCTGAAATATGAAATTTCAAGTCATCCAAAGTTAAAAGAAAATTTGATTTCTGTTGAAGATAGCAAAAGTCAAGGATTAGATGTTGATGTTGAAAATACTGGACCCCTTCTGCAGAAGGAAACATTTGGAGGATGCTGCGAACCAGGTTGCAATAGCAAAGCTAATAGACCTTGTGATAATGATATTGATTCTGGGGCTCGGGCTGGGGCCGGGGCCAGCAAATCGTCTAGTGATACTGGACAAGATATGGTTATTGGCCTCCTAGCGAAAGATTGCGTCGCTAAGGATGTTAATGGTGGTTGGAATTCTAATAAATTCATGCAGTCAGATATGGAGTCAAGGGATGATGTGAAACAAATGAGATCAAGGATTAGAAGTCTGTCTCCCAGAGCTGAGATTAAAGATGGAAAGAAACGGCCCAGAATTATATGTGATTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCCTGTAGCTTTCTTCATGTAAAAGATACTGTGGACAATACTGACCAGGAGGTTGGAGCAAACTTAGTTACTGCCCCTCAGAAGAAAGAATTGGAAATTGAAGAAGGTGTTAGGGAAAATGTTGAGACATCAAGGATGAATGAGCAAGAAGGAACCCCTAGTTGGCATCTATCTCAAGAAAAACAGAAGTTTCCTCTGAGGGACAATCTGTTTCCAGAGAATAGATTTGCATTTAGTGCATCAAACAATTATTTCAGTGCAAATCTTTCTTTAAATTCAACCCGGGCAGATGGAATGACTACTCTCCAGAACCAACATATGTACAAAGCATATGCTTCCCCATTTTTGAGCCATTCACCAAATTCAAGCCTGGTTACTCAATTTCCAGCTTCAAGTATGTCACTCTCCCACCGGATTCCAGCCAAATCAGGACATTCATTGCCTTTTAATTCATCTTTGACGGCTAGTAATGTGGATTCGCCAAAGTTTTTGAGTACAGACAAAGAACATCTCACCTCTAAGTCCACTTTCTCTGGTTCAGGGCGGGAAGAGTTTCCTCTAGTTAGTTCGTCTAGGGTTCCATCATATCCTCCTGGATATAAAACAAAAATCTGTTCTTATGATTGGGAACCTTCTGTGCCCTTTAGACCATCCTTTTTTATTACTTCTATGAATGTATCATCTCCTGGAGATCTTTATGACCCTCTTCGGGACAGCATTGAAATACCTAATATAGGAGATGGGTCTTTGAAGGCTTCCCTTCTAATACATGGATCAAATGTACAGGCTTCATCACAGGTTCGGCCATGTGGTGATTCTGCTGTAGTTGGGAAACACATGTCCAATGTTAATGATGATAAAAGTTCTGTATCTTCTCATAATAAAATTTGTGAAAATGAGCGAAACAAAAGTTGTGTTCCTCATGAAAAAGATTGCCTTCCACCTGAAACAGAGATAACATCAAGAACGTCTGTAGACTACCAAAATGGTAAAATAGGCATGGGACAGCATAACTTTGATGTTGCAGATACTAATAAAAAAGAGAGAGATTTGACTGAGTGTGATGCTAGATGTCATGGTGAAGGATCAGGGCACAAAAGACAGAGAGTAGACAGGGATAAGAAAAATCATGAAATGGATATTGACTTTCAGATGGATGGCAGCATGCAGAAGGAATCAAAGGCACTAAAAAATTTCCGTGCAGCTCTTGTTGATAATGTAAAAGAGTTGCTAAAACCCGCTTGGCATGAGGGTCGTCTCAGCAAGGATGCACACATTATGATAGTTAAAAAATCAGTTGACAAGGTTATTAGCACCTTAGAACCCCATCAGATTCCGACCATAGATACTGCTAAGCAATATGTTTCTTCAAGTCGGGTGAAAATTGCGAAGCTAGTCAATGGATACGTGAATAAATATGGCAAATCTTGATATGCAAGTCAAACACCATTTTGTACAGTTTCTGATCAGTTAGTTGGCTGATCCTAATTCATGAAAAGTTCTATCTGAGGCTCTCTTTTTCATAAAGAAGGTTGATTTGGAATGTTTAGGTTTTGATTTTTGTTTCAAAATGTTTGCTTACTGTTTTATCCATGACTTTCTCTTGCTTGTTCCCTTCTAGATTAAACTTGCATGAAATACATTGTTTATGAGGATACCTTATTTTCCGTAATTTACATAATTACATTTAGTTGTTCAATAACATTTGGTCTAATTTTCGAGCATTTGAAAATGATAGGC 3085 0.4107 MSHPDSPVAEDVDLDPSLEEEEEEEEEEEEEEDKEEGGVEIEEVEVVEEVEEEEVEEEEVEEEVEEEEEVEEEEEVEEEEVEEEEEEVEDETEGEEEVEEIEVEEEEEEEEEGQQAVVEEEEEEEEEEEEEEEEEEEEEEEEEEEVEEDGEGEKEEEEEEQQQQKAVEEKKEKQQQEEETVEEKAEQLKQQQQQQQAVEEDKTAVPDSPPNADGKDSLQHMESEEQVENLGPVSSLAENPEVMPHSSVHCVEENDAMLKTSVPSCEILTLKKEELPLKYEISSHPKLKENLISVEDSKSQGLDVDVENTGPLLQKETFGGCCEPGCNSKANRPCDNDIDSGARAGAGASKSSSDTGQDMVIGLLAKDCVAKDVNGGWNSNKFMQSDMESRDDVKQMRSRIRSLSPRAEIKDGKKRPRIICDFFAKGWCIRGSSCSFLHVKDTVDNTDQEVGANLVTAPQKKELEIEEGVRENVETSRMNEQEGTPSWHLSQEKQKFPLRDNLFPENRFAFSASNNYFSANLSLNSTRADGMTTLQNQHMYKAYASPFLSHSPNSSLVTQFPASSMSLSHRIPAKSGHSLPFNSSLTASNVDSPKFLSTDKEHLTSKSTFSGSGREEFPLVSSSRVPSYPPGYKTKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLLIHGSNVQASSQVRPCGDSAVVGKHMSNVNDDKSSVSSHNKICENERNKSCVPHEKDCLPPETEITSRTSVDYQNGKIGMGQHNFDVADTNKKERDLTECDARCHGEGSGHKRQRVDRDKKNHEMDIDFQMDGSMQKESKALKNFRAALVDNVKELLKPAWHEGRLSKDAHIMIVKKSVDKVISTLEPHQIPTIDTAKQYVSSSRVKIAKLVNGYVNKYGKS 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02033 908 MobiDBLite consensus disorder prediction 159 186 - -
Pste2g02033 908 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 419 439 IPR000571 GO:0046872
Pste2g02033 908 SMART c3hfinal6 415 440 IPR000571 GO:0046872
Pste2g02033 908 MobiDBLite consensus disorder prediction 12 158 - -
Pste2g02033 908 ProSiteProfiles Zinc finger C3H1-type profile. 414 441 IPR000571 GO:0046872
Pste2g02033 908 Coils Coil 41 202 - -
Pste2g02033 908 MobiDBLite consensus disorder prediction 1 231 - -
Pste2g02033 908 MobiDBLite consensus disorder prediction 187 201 - -
Pste2g02033 908 SUPERFAMILY CCCH zinc finger 414 438 IPR036855 GO:0046872
Pste2g02033 908 Coils Coil 18 38 - -
Pste2g02033 908 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 109 907 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02033 Pste-Chr2 20573785 20581299 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste2g02033 zf-CCCH 2.6e-06 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02033 2 20573785 20581299 Pste2g02033 2 20573785 20581299 ECH