Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02026 GTTTTGGTCCTTTTGGAAACTCACAGGTTCTCCAATGATGCAGAACAGACTCTAGGACCTCCTTGGGAGTCCCACAAACACCATGAGAAGGCATTCACAGTCTATAAAGAATGCATAATGAGTAGTGCTGATAAGAACAGGATGAGTATCAAAATTCCCTCACTGGGAAAGTTGAAGGTTTTCCCAGAAAAAAATGAGCCTTGGAAGAAGAGAATTCTTGATCCTGGCAGTGATGTCATTTTGGAGTGGAACCGGGCTTTCCTGTTTTCTTGTATTCTAGCACTCTTTGTTGATCCATTCTTTTTCTACCTCCCCTCAGTAGCAAATGATGGCAAGTCATCATGTATGGCTACTGATTTGAATTTGGGAATTGTTGTGACATGTTTCCGGACATTTGCTGATGTTTTCTATCTGCTCAACATGGCCATCAAGTTCAGAACTGCCTACGTGTCTCCAAGTTCAAGGGTGTTTGGTAGGGGTGAGCTTGTTATGGATCCTAGGCTGATTGCAAGGCGATATTTGAGATCAGAGTTCTTCCTAGATCTTGTTGCTACTCTGCCTCTTCCCCAGATTGTGATTTGGTTTATTATGCCAGCAATTAGAAGCTCTCATGCTGATCATACCAACAATGCACTTGTACTGATTGTTCTGCTTCAATATGTCCCCAGATTATATATGATTTTCCCATTAAGTTCTCAGATTATTAAAGCCACTGGTGTGGTTACAAAGACAGCTTGGGCTGGAGCTGCTTATAATCTGTTACTATACATGTTAGCTAGTCATGTCTTGGGGGCATCCTGGTATTTGTTATCAATTGAAAGGCATGCTACTTGCTGGAAATCTGAATGCAGAAATGAAATCCTCCCTGTTAAATGTGCTCTTAAGTACTTAGATTGCAGTACTTTAGACCATGATGATCGCATGAAGTGGGTAAATACAACCTCTGTGTTTGGTAACTGCAATCCAGAAAATAGCACCAGTTTCAACTATGGAATTTTTGGAAATGCAGTGATAAATAATGTTGTCTCCTCTGCGTTTATAGAGAAGTATCTCTATTGTCTGTGGTGGGGATTGCAGAACTTAAGTTCCTATGGCCAGAGTTTGACTACAAGCACATTTGTTTGGGAAACTGCATTTGCAATACTCATAGCTATTCTGGGGCTTGTTCTGTTTGCCCACTTAATCGGTAACATGCAGACCTATTTGCAATCTATTACCGTGAGGCTTGAAGAGTGGAGGCTGAAGCGCCGTGATACTGAAGAGTGGATGAAGCATCGTCAGCTGCCACAAAATCTGAGAGAATGTGTCCGAAGATTTGTTCAGTACAAGTGGCTTGCAACCCGTGGGGTTGATGAAGAAACAATCCTACGTGGCCTGCCTACTGACCTACGTAGAGATATCCAACGCCACCTTTGCTTGGACCTTGTTCGACGTGTTCCCTTTTTCTCACAAATGGATGATCAACTACTAGATGCAATATGTGAGAGATTGGTATCATCCTTGAGTACGCAAGGCACGTACATAGTCAGAGAAGGAGACCCGGTTACAGAGATGCTTTTTATCATCAGAGGGAGACTTGAAAGCTCAACCACAAATGGAGGCAGAACTGGCTTCTTTAACTCCATTACCTTGAGGCCTGGTGATTTCTGTGGAGAAGAGCTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTCAACTTGCCTTCTTCTACCAGAACAGTTAAGGCACTTGTGGAAGTGGAAGCCTTTGCACTAAGAGCAGAAGATCTTAAATTTGTGGCCAATCAATTCAGACGTCTTCACAGCAAAAAGTTACAGCACACTTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCTGCATGCTTCATTCAGGCTGCTTGGCGTCGTTTCAAGAAGAGAATGCTGGCAAAGAGCCTTAGCTTGAGGGAATGTCAGTCCTTCAACCATGATGAACAAGTCAGGGATCAAAGCGACCATGGAAAAGAAGAGCAAAGTGCAGTGACTTCAAACACTACACAAGTAAAACAGAACCTAGGTGTCACTATATTGGCATCTAGGTTTGCAGCAAACACAAGGAAGGGGGTTCAGAGGATCAAGGATGTGGAGCTGCCCAAGTTAAAAAAGCCTGAAGAGCCAGACTTTTCAGTAGAGCTTGATGATGATTAG 2169 0.4311 VLVLLETHRFSNDAEQTLGPPWESHKHHEKAFTVYKECIMSSADKNRMSIKIPSLGKLKVFPEKNEPWKKRILDPGSDVILEWNRAFLFSCILALFVDPFFFYLPSVANDGKSSCMATDLNLGIVVTCFRTFADVFYLLNMAIKFRTAYVSPSSRVFGRGELVMDPRLIARRYLRSEFFLDLVATLPLPQIVIWFIMPAIRSSHADHTNNALVLIVLLQYVPRLYMIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSIERHATCWKSECRNEILPVKCALKYLDCSTLDHDDRMKWVNTTSVFGNCNPENSTSFNYGIFGNAVINNVVSSAFIEKYLYCLWWGLQNLSSYGQSLTTSTFVWETAFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQNLRECVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKKRMLAKSLSLRECQSFNHDEQVRDQSDHGKEEQSAVTSNTTQVKQNLGVTILASRFAANTRKGVQRIKDVELPKLKKPEEPDFSVELDDD 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02026 722 FunFam Cyclic nucleotide-gated ion channel 1 479 597 - -
Pste2g02026 722 Gene3D Helix hairpin bin 409 472 - -
Pste2g02026 722 MobiDBLite consensus disorder prediction 651 672 - -
Pste2g02026 722 SMART cnmp_10 481 612 IPR000595 -
Pste2g02026 722 Pfam Cyclic nucleotide-binding domain 504 592 IPR000595 -
Pste2g02026 722 FunFam Cyclic nucleotide-gated ion channel 1 408 472 - -
Pste2g02026 722 SUPERFAMILY Voltage-gated potassium channels 77 403 - -
Pste2g02026 722 Gene3D - 89 407 - -
Pste2g02026 722 ProSiteProfiles cAMP/cGMP binding motif profile. 481 564 IPR000595 -
Pste2g02026 722 Pfam Ion transport protein 83 408 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g02026 722 Gene3D Jelly Rolls 479 599 IPR014710 -
Pste2g02026 722 CDD CAP_ED 481 612 IPR000595 -
Pste2g02026 722 SUPERFAMILY cAMP-binding domain-like 411 603 IPR018490 -
Pste2g02026 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02026 Pste-Chr2 20514568 20525100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02026 45 718 Ion Channels AT2G24610 73.275 0.0 1046
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02026 2 20514568 20525100 Pste2g02026 2 20514568 20525100 ECH