Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02022 CAAAATGTCGGATAACTGTGAGAAATTGGTAGCCATCCCTCCAACGAACAACCAATGGCCACAGAGTCATCATCAGGTGGATGATCACAAGGTTTTGATGGGTGGAGGTAGTAATAATAAGGTAATGGATCAAAACCAAGGTCAAGAGCAGCAACAAGAAGCTCTCAAGTGCCCTCGTTGTGACTCATCAAACACCAAGTTCTGCTACTACAACAACTACAGTTTGTCACAGCCACGACACTTCTGCAAAGCCTGCAAGCGCTATTGGACAAGAGGAGGAACCCTCAGGAACGTTCCTGTTGGTGGAGGGTGCAGAAAAAACAAGCGTGTCAAGCGTCCAATTACAGACTCCTCTTCTGCTGCCATTGACACTGCTTCTTCTGCTCCCACTGCTGCTTCACAACCCCAGATCGACACTGCTTCAACCTCAAATCACATCAACCCTTTGATTTATGGATTACCAACTAGCTCTACCGATGTGAATCTTCCATTGTTCTCCAGGTTCGGTCCTAGAATATCCAGTTCCGGCTTTGATCTACAGCTTAATAATGCTCTTGGATTAGGTTTTTCGTCGGGGGTTGTGTCCAACGAAGCCAGTGATAATAACGGTTACAGAAACGAGTTTGGTTCAAACAATACACTTGTTTCAACTTATAATTCCATCTTTGGTTCTTCTTCAAGTTCTACATCCACTACTCCAGCTCTGTTGAGCTCTACTTTGCTTCAACAGAAGTTCATCGGTGGTGTTGATAGTAACACTACTTTCCAGCATGGCTTAGGCTTAACCCCACTAGAACAGCTGCAAATGGCAAGTGATAGCAGTGAGGCAGGGATGGTGGCTTTAAAAGATGTGAAAGTAGAATTAGGACAAAACAACAGGTTGGAGTGGAATGGTGCTTGCCAAAACCAGATCCAGCATGTGGGCTTGTACGATCCTTCTCTTTATTGGAATAATAATACAGTTTGGAACGATCAAGCTAATAATATTGGTTCATCAGTCACTTCTCTGATCTAGAAAATACAATCCAATCGAAAGATGAAGAATGGTTTTCAAGTTTGTCTCCCCCTTCTGTCTTGTTGCTGCTACTTTTTTCTTTCTTTTTATATTTCTTCTTTCTTTTGGGCAAGATGGGTTTGCTTTACTTAATTACATCAAAACTTATTGAAAAAGGAGGAAAAGTGACACTGG 1189 0.4256 MSDNCEKLVAIPPTNNQWPQSHHQVDDHKVLMGGGSNNKVMDQNQGQEQQQEALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPITDSSSAAIDTASSAPTAASQPQIDTASTSNHINPLIYGLPTSSTDVNLPLFSRFGPRISSSGFDLQLNNALGLGFSSGVVSNEASDNNGYRNEFGSNNTLVSTYNSIFGSSSSSTSTTPALLSSTLLQQKFIGGVDSNTTFQHGLGLTPLEQLQMASDSSEAGMVALKDVKVELGQNNRLEWNGACQNQIQHVGLYDPSLYWNNNTVWNDQANNIGSSVTSLI 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02022 336 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 223 IPR045174 GO:0003700|GO:0006355
Pste2g02022 336 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Pste2g02022 336 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Pste2g02022 336 MobiDBLite consensus disorder prediction 108 139 - -
Pste2g02022 336 MobiDBLite consensus disorder prediction 116 139 - -
Pste2g02022 336 Pfam Dof domain, zinc finger 52 108 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02022 Pste-Chr2 20427941 20429339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02022 54 336 C2C2-Dof Transcription Factor Family AT1G28310 42.208 2.05e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste2g02022 zf-Dof 1.4e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02022 2 20427941 20429339 Pste2g02022 2 20427941 20429339 ECH