Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02018 ATGGTCAATTATGTGTCCGATTATGAGAAGGAAAGATCATCGGAAGATTCGGACGAGGACTCCAATTGGTGGCTCATTCGGTGGGAGGAGTGCGTAGGAAGGATGTCAAATTCGAATTTTGAATTTGAAGCGGGAAATTGGTTAGAATCAGAGAGTTATGATTCAACCACCCAATCTTTGACTGATTTGGAGGATGTAGATAATGCTCAATATGCTATTTGTTGCAATAAAGAACCCAATTCTGAAGAAATGGCCAATGCAAAATTTCCTTTAATACAAATGATAAATGCAAAGTTAATTTGTAATGAGATTGATACGAGTAAGATTCGAGATATGCAAGGAGATGGGTTCAACAGGTTTGGAGAAGAGGGGCCCAAGGGGGGCATAGACATCAACTTGGAGAAGTCAGGCTTAAGCTCGTCAAGGAGTGAAGAGGCGAACATAGGAGGTATGGTTAGTAATGGGCCTTATAGCTCAAATACCCCATGTGTGGTGGTTGTATTGATGAGTAAAGGGGCGAACAGGGGAGGTGTGAATCGAGCTTTGGAGAAAGTTGGCGTTGGTTCCCTAGACGCATCAGTCTTGCTTGATGGTGGTTGTGAAGATCATAATACTCTAAAAGGGGATAATGGAGAGAGAGGCTTGTTGGGAGGATTGAAGGAGGTTTTCTTGGAGATGGAAGGTCTAGTAGATGTAGAGTTAGAATATGCAGACGAGGAGGGCAATAATTTACTAAGGAAGAAGGTCAAACGCAGAGATAGGAAAGGAAACCTGAAGGGAGTAACCAATCCTCACAAGAAAAGATATGGCAGCAATGTTCATAACCAGAAACTCCCTCTTTCGCTTCTCAAAGTCTCTTCCTCATGCCTCTTCAGTCTCCCAGAGACCCTCCAGAGTCACCTTCGCCTCCACTCCCAACTCTTCAAACCAGAAGAGAGAAGAGATTGGACAGCGGAGGCAGATGAAATGAGTGAGAGGGGCAAAGAAACAATGAGAAAAGGCTTTGACAGGAGCAAGGAATACGCGGAGGAAGCAAAGGAGCAGACAAAGGATGCGGCGGAGTCAATGAAGGACAGTGCAAAGGATGCTGCAGGAACAGTGGCGGATAAGAGTAGGGAAGGGGTGGAGAGGACGAAGGAGAAGACGGAGGAGATGGTGGGGTCTCTCAAAAACGTAGGTGAGAAGGCGAAGCAGGGCATGCAAGGGGCGTGGGAGAAGGCGAAGGACACCACCCACAAGATCAAGGATACAGTGGTTGGCAAAGATGATGATGATCGTCATGGGGGTCCCAAGGATAAGGATGAGGATGTGGCTGACTTGAAGAGAAGAGTTGAGGACGGAACTCCTTGTTTCCGTGGATGTGGAAGGCGCAATGGAGAGCGTAGGGGGAAGTCTATTCGTGGGAGCATTGTCAGCCCAGATCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAGGGTGAAAATGATTTACCAGGCCTAACAGACCTTGAAAAGCCAAGGTTGAGGGGTCCAAAGAGAGCTTCTAAAATTCGCAAGTTGTTCGACCTGTCTAAGGAGGATGATGGAAAAAGAAGCAAAGCTCCAAAGATACAACGTCTGGTCACTCCCCTGACCCTCCAAAGAAACAGGGCTAGGATTGCAGATGAGAAGAAAAGAATTGCTAAAGCAAAATCAGAGGCAGCATAA 1686 0.462 MVNYVSDYEKERSSEDSDEDSNWWLIRWEECVGRMSNSNFEFEAGNWLESESYDSTTQSLTDLEDVDNAQYAICCNKEPNSEEMANAKFPLIQMINAKLICNEIDTSKIRDMQGDGFNRFGEEGPKGGIDINLEKSGLSSSRSEEANIGGMVSNGPYSSNTPCVVVVLMSKGANRGGVNRALEKVGVGSLDASVLLDGGCEDHNTLKGDNGERGLLGGLKEVFLEMEGLVDVELEYADEEGNNLLRKKVKRRDRKGNLKGVTNPHKKRYGSNVHNQKLPLSLLKVSSSCLFSLPETLQSHLRLHSQLFKPEERRDWTAEADEMSERGKETMRKGFDRSKEYAEEAKEQTKDAAESMKDSAKDAAGTVADKSREGVERTKEKTEEMVGSLKNVGEKAKQGMQGAWEKAKDTTHKIKDTVVGKDDDDRHGGPKDKDEDVADLKRRVEDGTPCFRGCGRRNGERRGKSIRGSIVSPDLSVLNLVIVKKGENDLPGLTDLEKPRLRGPKRASKIRKLFDLSKEDDGKRSKAPKIQRLVTPLTLQRNRARIADEKKRIAKAKSEAA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02018 561 Gene3D - 500 561 - -
Pste2g02018 561 Pfam Ribosomal protein S6e 424 495 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02018 561 PANTHER 40S RIBOSOMAL PROTEIN S6 445 561 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02018 561 Gene3D Helix hairpin bin 329 447 - -
Pste2g02018 561 MobiDBLite consensus disorder prediction 315 390 - -
Pste2g02018 561 MobiDBLite consensus disorder prediction 406 464 - -
Pste2g02018 561 SMART Ribosomal_S6e_2 389 495 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02018 561 Coils Coil 539 559 - -
Pste2g02018 561 MobiDBLite consensus disorder prediction 315 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02018 Pste-Chr2 20368450 20377474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02018 444 561 Cytoplasmic Ribosomal Protein Gene Family AT4G31700 74.074 4.34e-49 166