Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02017 AGTCACCTCACGCCTCTGATTCGTAATTCGAAAACCCTAATTTCTTTAATCCTTTCACTCAACAGCGCTGACAAGAACAGTGAGACTCGAAGCTAGATTTCAAGATGAAGTTTAACATTGCGAATCCCACCACCGGTTGTCAGAAGAAGCTGGAAATCGATGATGACCAGAAGCTTGAAATTTTACCGTTAGCGATTGTTTTCCTCCTGATGCTACGGGGTTATGCAACTTTTAATTCAAATGTCTCTGCATTTCTACGCACGGGTAATAAATGGGAGTTGAAATCTGTGTTACGAGCATTTTGGGACAAGAGGATCTCACAAGAGGTTGTTGGTGATGCTTTGGGTGAGGAGTTCAAAGGCTATGTCTTCAAAATCACTGGAGGATGTGACAAGCAAGGATTTCCAATGAAGCAAGGAGTGTTGACCCCTGGTCGTGTTCGCCTCTTGCTGCATAGAGGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTTGGTAATTGTGAAGAAGGGTGAAAATGATTTACCGGGCCTAACAGACGTTGAAAAGCCAAGGATGAGGGGTCCAAAGAGAGCTTCTAAAATTCGCAAGTTGTTCAACCTGTCTAAGGAGGATGATGTGAGGAAGTATGTCAACACATACAGGAGAACATTTACAACTAAAACTGGGAAAAAGGTGAGCAAAGCTCCAAAGATACAACGTCTGGTCACTCCCCTGACCCTCCAAAGAAAGAGGGCTAGGATTGCAGATAAGAAGAAGAGAATTGCTAAAGCAAAATCAGAGGCAGCAGAATACCAGAAACTTCTTGCCTCCAGATTGAAGGAACAAAGAGAACGCCGGAGTGAAAGCTTGGCTAAGAGAAGATCAAAGCTTTCTAGTGCTACTAAACAAGCCACAACAACATAAGCTATTTTCAGACATATGGAGTTTAATTTTCGGTCTAGTTTTTTATAGTATTATTTCATGATCCCTTTGTTTTGATATTTTGTTATTTAAATACTTCAAAATATTTCTTTTATGCCGTTTTTGACAGTTTACATTAATTTTATCTTGTTGAAATCTATGAAGCACGATTACTTCAATTGAATGAAGTGTCTTCATTTGGACACATTTGGGA 1182 0.4112 MKFNIANPTTGCQKKLEIDDDQKLEILPLAIVFLLMLRGYATFNSNVSAFLRTGNKWELKSVLRAFWDKRISQEVVGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKRRSKLSSATKQATTT 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02017 288 ProSitePatterns Ribosomal protein S6e signature. 91 102 IPR018282 GO:0003735|GO:0005840|GO:0006412
Pste2g02017 288 MobiDBLite consensus disorder prediction 258 288 - -
Pste2g02017 288 Coils Coil 228 255 - -
Pste2g02017 288 Gene3D - 172 273 - -
Pste2g02017 288 SMART Ribosomal_S6e_2 1 167 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02017 288 MobiDBLite consensus disorder prediction 258 276 - -
Pste2g02017 288 PANTHER 40S RIBOSOMAL PROTEIN S6 1 279 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02017 288 Pfam Ribosomal protein S6e 61 167 IPR001377 GO:0003735|GO:0005840|GO:0006412
Pste2g02017 288 PIRSF RPS6e 1 29 IPR014401 GO:0003735|GO:0005840|GO:0006412
Pste2g02017 288 PIRSF RPS6e 52 288 IPR014401 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02017 Pste-Chr2 20364540 20367026 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02017 1 281 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 62.989 7.17e-112 320