Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02009 ACAATCTCCATCTAATGACCCTACTAAATATTACACTGCTAAAATTAAAAAAAAGGAAACATATCCTCTTTAGTCTCCACCTGTCTTTCTCTTTCTTTATGGAAAATATGGTATTAGGTGCGCCATTTTTCTATCCTTGCAAACGGTATTGGCAAACAGAAACACCCTTTCGAGCATAGCGATTTGATCTCTCCACCTTGGTGAAAGCCTTGTGACCCATGAGGCTTTTACTGAAGGTGGGATTTGGCTTCCGCTGTTGAGTTTATGGAGGGTCAAGTTCCTTGTTGAATAGTGCTTGTGTTGCCTATATCTTTAGCTTTAATCAAACCAATCCTTCCCTTTTTGTTTCCCAATGGAAAGATCGGTTTTTTGTGATTCCTCCACTCATTGTTGTTGAACTGTCTTGAGAAATTTATCTAGTTTTGAGACCTCTTTGTAGGTAGATGTGGAGGAGTTTCAGTTTTGTCAGTGCAAGATCTTTATAATAAGGTTTTTGTAGAAAGGAAAAGTTGTGAATAAGATGGGTGAAGATACTAATTCGTGGATTAGGAGGACAAAGTTTTCACACACAGTGTGTCATCGTTTGGATCCTTCTAGGTTAGGCTCTATTCCTATCAGCATTCAGTCAGAGCAAACGTCAAGGCCTGACTCACAGGTTCAGAGACACCCCATAACAAACAAGCAGAGATCTTTGTCACCCTTGCCTGAGACTTTTCTTTCTGAGGTCTTCAGGGAAGCTAGACATGAACAGAAGAGGTTCTCCACACCGAATCCCCGGAGGGAAAAGAAGATTATGGGGAAGTTGTTGAACAAGGATACTCGGGAGACTAAAGAATCAAGTTCAAACCGTAATCCAAATAAGCAAGTGAAGTCAAAGCACCATAAGGATTCAGCATGGACTAAGTTTTTGGATAATGGTGGAGGGAAGATTACTGCTGTAGAAACAGCTGAAGAGTGGAATGTTGACATGTCACAGCTATTTTTTGGCCTTAAGTTTGCTCATGGGGCTCATAGTCGACTTTACCATGGTGTATATAAGGATGAGGCTGTTGCCGTTAAAATAATTATGGTGCCTGAAGATGATGAAAGTGTAACCTTAGCTTCTCGATTAGAGAAACATTTCATTAGAGAAGTCACCCTTCTATCTCGCCTTCACCATCCGAATGTTATAAAGTTCTCAGCGGCATGCAGAAAACCACCCGTCTATTGTATTATCACAGAATATCTTGCTGAAGGTTCCTTGAGGGCTTATTTACATAAATTGGAACACCAGGCTATTTCTCTAGAAAAGCTAATAGCTTTTGCTCTGGATATTTCTCGAGGAATGGAATATATACATTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTCCTTATCAATGAAAACTATCACCTTAAAATTGCTGATTTTGGCATTGCATGTGAAGAAGCATCTTGTGACATATTGGCTGATGACCCTGGCACCTACCGTTGGATGGCACCAGAGATGATCAAACGGAAATCCTATGGGAGAAAGGTTGATGTCTACAGTTTTGGGCTTATTTTATGGGAGATGTTGACTGGAACGATACCATATGAGGATATGAATCCAATACAGGCTGCTTTTGCAGTAGTAAATAAGGTATTTTCCTTTGTAATTCAAGTCATCTAG 1660 0.4012 MGEDTNSWIRRTKFSHTVCHRLDPSRLGSIPISIQSEQTSRPDSQVQRHPITNKQRSLSPLPETFLSEVFREARHEQKRFSTPNPRREKKIMGKLLNKDTRETKESSSNRNPNKQVKSKHHKDSAWTKFLDNGGGKITAVETAEEWNVDMSQLFFGLKFAHGAHSRLYHGVYKDEAVAVKIIMVPEDDESVTLASRLEKHFIREVTLLSRLHHPNVIKFSAACRKPPVYCIITEYLAEGSLRAYLHKLEHQAISLEKLIAFALDISRGMEYIHSQGVIHRDLKPENVLINENYHLKIADFGIACEEASCDILADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTGTIPYEDMNPIQAAFAVVNKVFSFVIQVI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02009 379 Gene3D Phosphorylase Kinase; domain 1 141 236 - -
Pste2g02009 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 103 368 - -
Pste2g02009 379 CDD STKc_MAP3K-like 160 370 - -
Pste2g02009 379 MobiDBLite consensus disorder prediction 74 127 - -
Pste2g02009 379 ProSiteProfiles Protein kinase domain profile. 153 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02009 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Pste2g02009 379 Gene3D Transferase(Phosphotransferase) domain 1 237 376 - -
Pste2g02009 379 MobiDBLite consensus disorder prediction 36 59 - -
Pste2g02009 379 Pfam Protein kinase domain 162 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02009 379 SUPERFAMILY Protein kinase-like (PK-like) 141 376 IPR011009 -
Pste2g02009 379 SMART serkin_6 153 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g02009 379 MobiDBLite consensus disorder prediction 74 108 - -
Pste2g02009 379 FunFam Serine/threonine-protein kinase isoform 1 143 237 - -
Pste2g02009 379 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Pste2g02009 379 PRINTS Tyrosine kinase catalytic domain signature 317 327 IPR001245 GO:0004672|GO:0006468
Pste2g02009 379 PRINTS Tyrosine kinase catalytic domain signature 336 358 IPR001245 GO:0004672|GO:0006468
Pste2g02009 379 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02009 Pste-Chr2 20293808 20296022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02009 1 370 MAP Kinase Kinase Kinase AT5G58950 55.294 5.61e-166 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste2g02009 Pkinase 5.5e-53 CL0016