Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g02000 GAAAAAATTCCAGTAGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGCAGGTCTAACATCAGACGAAGGAGCCAGTCGGCTTCAAGTTTTTGGACCAAACAAATTGGAAGAGAAAAAGGAAAGCAAAATTTTGAAGTTTTTGGGTTTCATGTGGAACCCCTTATCCTGGGTCATGGAAGCTGCAGCTATAATGGCCATTGCTTTGGCCAATGGTGGAGGAAGGCCTCCGGATTGGCAAGATTTTGTTGGTATCATTGCTCTATTGTTCATCAACTCCACAATCAGTTTCATCGAAGAAAATAATGCTGGCAATGCTGCTGCTGCTCTTATGGCTGGTTTAGCTCCCAAGACCAAAATATTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAAAGGGTTCATGGAGTGATTGACAAATTTGCTGAGCGTGGTCTACGTTCTTTAGGTGTTGCTAGACAGGAAATACCTGAGAAAAACAAGGATAGTCCTGGTGCACCATGGCAATTTGTTGGCTTGCTACCACTTTTTGATCCTCCAAGGCACGATAGTGCGGAAACCATCACGAGAGCCCTGAACCTTGGTGTGAATGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGAAGGCTTGGGATGGGAACAAACATGTACCCTTCTTCTTCATTGCTTGGCCAAAGCAAGGATGCTTCTGTTTCGGCTCTTCCAGTCGATGAATTGATCGAAAAGGCTGATGGATTTGCTGGAGTATTTCCTGAACACAAATATGAAATCGTGAAGAGGCTGCAAGAGAGGAAGCATATATGTGGAATGACAGGTGATGGTGTCAACGATGCCCCTGCATTAAAGAAAGCAGATATTGGAATTGCCGTTGCTGACGCTACAGATGCTGCTAGAAGTGCTTCTGACATTGTCCTCACCGAGCCTGGTCTGAGTGTCATTATTAGTGCAGTGCTCACCAGCAGGGCAATTTTCCAAAGGATGAAGAACTATACTATCTATGCTGTGTCAATCACTATTCGTATAGTGTTTGGTTTCTTGTTTATTGCATTGATTTGGAAATTTGATTTTGCACCCTTCATGGTGTTGATTATTGCCATACTAAACGATGGTACTATCATGACAATATCCAAAGATCGAGTGAAACCATCTCCACTGCCAGACAGCTGGAAGCTGAGGGAGATATTTGCCACTGGTGTTGTGCTAGGTAGTTACTTGGCACTAATGACAGTAGTATTTTTCTGGCTCATGAAGGATACCGATTTCTTCTCGGACAAGTTTGGTGTGAGGTCTATAAGAAAAAGCCCTGGAGAAATGATGGCAGCCCTGTACCTACAAGTCAGTATTATAAGTCAAGCATTGATTTTTGTCACTAGATCCCGCAGCTGGTCCTATGTTGAAAGACCTGGTCTTCTCCTGCTGAGTGCTTTTATGATTGCACAACTGGTGGCAACTTTTCTAGCAGTATATGCTAACTGGGGCTTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGCTGTCATCTGGCTCTACAGTTTAGTGACATATATCCCTCTTGATATACTCAAATTTGCAATCCGCTATGTTCTAAGTGGAAAGGCTTGGGACAATCTTTTGGAGAACAAGACTGCCTTCACTACAAAGAAAGACTATGGCAAAGAAGAGAGAGAAGCCCAGTGGGCAGCTGCACAGAGGACTCTTCATGGTCTTCAGCCACCTGAAACAACCAACCTTTTCAATGACAAAAATAGCTACAGGGAGCTTTCAGAGATTGCTGAGCAAGCCAAGAGACGTGCTGAGGTAGCAAGGCTCAGGGAGCTTCATACTCTTAAAGGACACGTAGAGTCCGTGGTGAAGCTGAAGGGACTTGACATTGATACAATCCAACAGCATTATACGGTTTAAGGAGTTTAGACTACCTTCAAGAAGAAGTCACTTTGGTGCTTGTCCAACAAATATAATGAAGACCTAAGTTAATCCGCTTTAGATTAGAATGAAGGTCCTTTTGTGAAAATTTGAAGGGTTACTCTTCTATTTCCATCTGTGTCACTAGCTGGAGGAGAAACTATGCTCCCTCTTAGGTACCAAATAACAACGTATAGGATTTACTAGCGTCTTATTTTGGAAATGTTAACGACATCAAGATCACTTTAAGGCTCTATTTTTTTTAAGATAAACAAAACTCAATATATCTTCGATCTTGATTAATGTTGCTCAATAATGAATTCAATTTCATGTTTCTTTCTCACAC 2269 0.4257 EKIPVEEVFEQLKCSRAGLTSDEGASRLQVFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGRPPDWQDFVGIIALLFINSTISFIEENNAGNAAAALMAGLAPKTKILNLCNCKEDVRKRVHGVIDKFAERGLRSLGVARQEIPEKNKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDASVSALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLALMTVVFFWLMKDTDFFSDKFGVRSIRKSPGEMMAALYLQVSIISQALIFVTRSRSWSYVERPGLLLLSAFMIAQLVATFLAVYANWGFARIKGMGWGWAAVIWLYSLVTYIPLDILKFAIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g02000 640 FunFam ATPase 4 plasma membrane-type 261 504 - -
Pste2g02000 640 NCBIfam HAD-IC family P-type ATPase 252 367 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 SMART Cation_ATPase_N_a_2 1 71 IPR004014 -
Pste2g02000 640 Gene3D - 120 183 IPR023299 GO:0000166
Pste2g02000 640 Gene3D - 589 640 - -
Pste2g02000 640 Pfam Cation transporter/ATPase, N-terminus 2 65 IPR004014 -
Pste2g02000 640 SUPERFAMILY HAD-like 132 324 IPR036412 -
Pste2g02000 640 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 536 IPR023298 -
Pste2g02000 640 Gene3D - 50 119 - -
Pste2g02000 640 Gene3D - 278 535 - -
Pste2g02000 640 FunFam Plasma membrane ATPase 170 325 - -
Pste2g02000 640 FunFam Membrane H(+)-ATPase1 117 177 - -
Pste2g02000 640 PRINTS H+-transporting ATPase (proton pump) signature 449 470 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 PRINTS H+-transporting ATPase (proton pump) signature 249 265 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 PRINTS H+-transporting ATPase (proton pump) signature 308 333 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 PRINTS H+-transporting ATPase (proton pump) signature 277 293 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 PRINTS H+-transporting ATPase (proton pump) signature 134 152 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste2g02000 640 PRINTS P-type cation-transporting ATPase superfamily signature 172 183 - -
Pste2g02000 640 PRINTS P-type cation-transporting ATPase superfamily signature 277 296 - -
Pste2g02000 640 PRINTS P-type cation-transporting ATPase superfamily signature 300 312 - -
Pste2g02000 640 PRINTS P-type cation-transporting ATPase superfamily signature 194 204 - -
Pste2g02000 640 PANTHER CALCIUM-TRANSPORTING ATPASE 119 572 - -
Pste2g02000 640 Coils Coil 591 611 - -
Pste2g02000 640 Pfam haloacid dehalogenase-like hydrolase 171 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g02000 Pste-Chr2 20193508 20198711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g02000 115 640 Primary Pumps ATPases AT2G24520 87.072 0.0 956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00598 8 3095697 3106129 Pste2g02000 2 20193508 20198711 PCT