Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01972 GTTAATGTTATCACTAACTAATTCTATTTTCACATTTCACTTTGACATGCTCTTTGCTCCTTCCACTTTTCCATTGCTTTCTCATTCATTCTGCATTCAATTTTCCACCTCCTTTTTCTTATCCAAAGCAGATTGCAGAGTATAGCAGAAGCATTATGACTTGTGGCTGTTTTGGAGCCAAATCTATAAAGGAAAGGCGCCCTTCTAATGCTCCTGGTTATCTACTATATAATGTTAGGCAATTTTCTGATAAAGAACTGAGATTGGCAACTGGTAATTATCATTCAAATAATAAGATAGGACGAGGTGGTTTTGGAACCGTCTACCAGGGAACCTTAAGAGATGGGAGGCGTATAGCAGTGAAGACTCTCTCAATTTGGTCAAAGCAGGGAGTCGGTGAATTTTTGGCTGAAATTAAAACTTTGTCAAACGTTAAACATCCAAACCTTGTTGAACTGATTGGATTCTGCATTCAAGGACCTAGTCGTACATTAGTCTACGAGTATGTGGAAAATGGAAGCCTTAATAGTGCACTACTTGGCACAAGGAATGAAAATATGAAACTGGACTGGAGAAAAAGATCTGCTATCTGTGTAGGTACTGCTAAGGGTCTTGCATTTCTTCATGAAGAACTCGCACCGCCTATTGTGCACAGAGACATCAAAGCCAGTAATGTTCTACTTGACAGAGATTTCAATCCCAAAATAGGTGATTTTGGGTTGGCTAAATTATTTCCAGATGACATCACTCACATCAGCACAAGAATTGCTGGAACAACTGGTTACTTGGCACCGGAATATGCATTAGGAGGCCAATTAACAAAGAAGGCTGATATATACAGCTTTGGGGTTCTTATACTTGAAATAGTTAGTGGCAGAAGCAGCGCCAGAAGGATAAACGGGGGTGGATCACACAAATTCCTCTTGGAATGGGCCTGGCAACTTTACGAAGAGGGGAAATTGTTGGAGTTTGTAGATCCAGACATGGAAGAATTTCCTGAGGAAGAGGTAATCAAGTACGTGAAGGTTGCTCTTTTCTGCACACAGTCAGCAGCAAGTAGAAGGCCTTTGATGATACAAGTTGTTGACATGCTATCCAAATCCAAGCCAATCCAACTCAATGAGAAAGAACTTACAGCACCAGGATTCTTCACAAATGAAGGAGAATCCTCTACAAAAAACTCATACCCTGTCTCTTCTACTACCTCTACTCATGTTACTGTTACTCAGGTGACCCCCCGGTGATGCGAATTGCAGGGTTGCAAATTGAGACAAAAAAAAAAAATAGTGTTTACTTTTTAAACGATTAATTGATTGTCTTCTGTCATTTTGTTCCATTTTTTATTCAAAGAATATCACATGACATGAAAGTA 1372 0.3958 MTCGCFGAKSIKERRPSNAPGYLLYNVRQFSDKELRLATGNYHSNNKIGRGGFGTVYQGTLRDGRRIAVKTLSIWSKQGVGEFLAEIKTLSNVKHPNLVELIGFCIQGPSRTLVYEYVENGSLNSALLGTRNENMKLDWRKRSAICVGTAKGLAFLHEELAPPIVHRDIKASNVLLDRDFNPKIGDFGLAKLFPDDITHISTRIAGTTGYLAPEYALGGQLTKKADIYSFGVLILEIVSGRSSARRINGGGSHKFLLEWAWQLYEEGKLLEFVDPDMEEFPEEEVIKYVKVALFCTQSAASRRPLMIQVVDMLSKSKPIQLNEKELTAPGFFTNEGESSTKNSYPVSSTTSTHVTVTQVTPR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01972 362 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 21 117 - -
Pste2g01972 362 SUPERFAMILY Protein kinase-like (PK-like) 18 313 IPR011009 -
Pste2g01972 362 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 343 - -
Pste2g01972 362 SMART serkin_6 42 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01972 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pste2g01972 362 ProSiteProfiles Protein kinase domain profile. 42 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01972 362 CDD STKc_IRAK 48 315 - -
Pste2g01972 362 Gene3D Transferase(Phosphotransferase) domain 1 118 327 - -
Pste2g01972 362 Pfam Protein kinase domain 42 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01972 362 Gene3D Phosphorylase Kinase; domain 1 8 117 - -
Pste2g01972 362 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Pste2g01972 362 FunFam Putative LRR receptor-like serine/threonine-protein kinase 118 325 - -
Pste2g01972 362 MobiDBLite consensus disorder prediction 330 362 - -
Pste2g01972 362 MobiDBLite consensus disorder prediction 332 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01972 Pste-Chr2 19944415 19947621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01972 30 361 Receptor kinase-like Gene Family AT1G56120 48.348 8.62e-103 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste2g01972 Pkinase 9.6e-46 CL0016