Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01941 ATGGTTGCACAAGGTCAGCAGTTGGCGCCTTCCCAAACTTCCAATGGTCCTCCTTCTGAAGCTAGAGATAGAAATGCTGAACGTAATACCAGCCAGATTGATCCCAGGGAGAGGAATGGGGAGGGCAATGCTGTTGAGCGAGGCAGTGCTGCAGGACTAAATACACAGCCTTTTAATAGTACTCCACAAACTCCAGTTGCTTCTGCAACTTCTGGATTGGTTGGCGACAGAAGAATATCTTTGGGCGCAGGAGCTGGTTGTGCTGGCCTTGCTGCACAATTGGAACAGGGATATCGTCAGGCAAGAGAGGCCGTCCGCTCTAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCGCGCATATATTCACCTCCTGCTTCTCTGGACTGTCTTCGTGCTCTAGCATGCAGAGTCCTGCTCGGGTTAGCTAGAGATGATACTATTGCACACATATTGACAAAGCTTCAGGTTGGGAAAAAGCTATCTGAACTGATTCGGGATTCAGGCAGCCAAACACCTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCCCAGGCCGCAATTGAGCTTATTGGGATTGTGACCAATTCTGGGCGTGCAAGTACATTAGCTGCTACTGACGCAGCTACTCCTACTTTAAGGCGCATAGAAAGAGCAGCTATAGCTGCTGCCACTCCTATTACATACCATTCAAGGGAACTCTTGCTCCTTATTCATGAACACCTACAGGCTTCTGGATTGGGGCAAACTGCTTCTTTGTTGCTTAAAGAGGCTCAGTTGAATCCTTTGCCATCATTGGTTCCTCCCTCTTCTCTTGCACAACAGCCCACCACACAGGAAGCTTCCTCAACTCAAATTCAGTGGCCCTCTGGTCGTACTCCTTCTGGATTCCTCACTAACAAATTGAAGTTTAACGCAAAGGATGAGGATGCCAGCATGAAAACTGATTCTTACTCTGCAAAGAAAAAAGCGCTGACTTTCTCATCATCTTTTCATTCAAGACTTCAAATTCTTGACTCTCAGCATTCATCAGTTAGGAAATTGACAAATACTTGTAAAGAGTCTTTAGAAACTAGTGCGGTAGAGACTACAGCTGAATCTTCAGTCAAACATAACATTGATACTGGGTCTCAGTTTAAGACTCCAAGTACCTTGCCAACAAAACGAAAGTTTTGTGATTTAAAAGATATATCAATGTTTTCATCATCTGGAAAAAGATTAAATGTTGGTGATCAAGGACTTCGCTCTCCTATTTGTTCAAGTGCAATTCGTAAAAGCAGCCTGCAGACTGATGCTGTTGGGCTTTTCACACCAATTTGCAATCAGAGAAATCAACAAGGCCGATTTACAGGTGACATGGTGGACGAGAATCAGTACAGTAATTCAAATCTAGGTCAGATGACAACATCCTCCCAAGTATTAAATGACATTCAGCCCAACAACCCTGAGCGTGTAACATTAGATTCTCTGGTGGTTCAGTATTTGAAGCATCAGCATCGTCAGTGTCCAGCTCCTATTACTACTCTTCCTCCACTGTCTCTTCTGCACCCACATGTTTGTCCTGAACCAAAGCGAAGCCTTGATGCCCCTTCTAATGTGACAGCTCGGCTTGGTACACGCGAATTTAAATATATGTATGGGGGAGTGCATGGGAATCGCAGGGATCGTCAATTTGTTTACAGTCGGTTTAGGCCATGGCGCACTTGTCGGGATGATGCTGGTGCCTTGTTAACTTGCATTACATTTGTGGGAGACTCTTCTCACATTGCTGTTGGAAGCCATAATGGGGAGCTCAAATTTTTTGATTCCAACAACAGCAATGTGGTGGAGAGCTTCACAGGTCACCAAGCTCCTTTGACTCTTGTTCAGTCTTTTGTTTCTGGTGAAACCCAGTTATTACTTTCTTCAAGCGCCCAAGATGTTAGATTATGGGAAGCAACATCAATTTTAGGTGGTCCTACGCATTCATTTGAAGGATGCAAGGCTGCCAGGTTTAGCAATTCTGGTAATGTTTTTGCAGCCTTGTCAGCAGAATCTGCACGGCGGGAAATCCTCTTGTATGATGTCCAAACATGTCAGGTAGAGTCAAAGTTGTTGGATACATTTACAACTTCTACAGGGCGAGGTCATGTTTATTCTTTAATCCATTTTAATCCTTCCGACTCAATGCTGCTTTGGAATGGTGTCTTATGGGACCGGCGGGTTTCTGGGCCTGTTCATCGCTTTGATCAGTTTACAGACTATGGTGGTGGAGGCTTCCATCCTGCTGGCAACGAGGTTATTATAAATTCTGAAGTCTGGGATCTGCGCAAGTTTAGATTGTTACGTAGTGTACCTTCATTAGATCAAACCTCAATAACATTCAATGCACGTGGGGATGTAATGTATGCAATCTTAAGGAGAAATCTTGAGGATGTAATGTCAGCAGTCCACACTCGTCGTGTCAAGCATCCCCTTTTTTCAGCTTTCCGCACAGTGGATGCAATAAATTATTCTGATATTGCTACTATCCCTGTAGACCGCTGTGTTCTTGACTTTGCAACTGAGCCAACAGATTCATTTGTCGGGCTTATTACTATGGATGATCAAGATGAGATGTATGCTTCTGCTAGAATCTATGAAATTGGTCGTCGAAGGCCAACTGACGATGATTCTGATCCTGATGATGCTGAAAGTGAGGAGGAAGATGAGGATGATGATGATGATGATGCTGATGTGGATCCTCTTTTAGGCCCTGGTCTTGGTGGGGACAGTGGAAGTGATGCTGATGACATGAGCAATGATGAAGACGATGATGATGATAGTGTAAGTGAGCTGGATGAAGACGAAGATGGAGATTTTATTTTGGACGATGTAGACTTTGATGGAGGACCTGGCATATTGGAGATTGTGACAGAAGGTGATGAGGATGATGATGATAGTCAGGTACTTGAATCCTTAAGTAGCGATGATGAGGATTTTGTGGGTAATGGCTTTGGTTATTAATTTTTAATCGAGAAGCTGTAATTATTTCTTTCTTCATTATATTCATTTTTGAGCAATAGGTCATTTTTTTTTTGCTCAAAATTTTGCTGTTATCTTTCACCTTTATGTTCACTGCGAATTTATTACTATGCTGTAAGGTCTAGAAGCGCAGTTTGTATATAATGTTACAAAACCGCCGTTTTACCGGGAGCCACAATGTGGCCTATGATTTTTCTGCTTCTAGATATTCGGAGCAGAGATGTCCACGTTCGTAGTAATAAGGTAATAGAGGAAGAAAGATTGTATTCCTTAACTTGCTTCACGCAACATCTAGATTGTGTTCTAAATTTTTTAGTAGGACTATTATTCTGCTGACCGAAAAGATATTTGACAGTGTGCATAGAGCTTAACAGTAACCCAACCTTACTCTTTGTTACATGTTGGAA 3416 0.4306 MVAQGQQLAPSQTSNGPPSEARDRNAERNTSQIDPRERNGEGNAVERGSAAGLNTQPFNSTPQTPVASATSGLVGDRRISLGAGAGCAGLAAQLEQGYRQAREAVRSNNGIKVLLHLLQPRIYSPPASLDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGSQTPGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLLIHEHLQASGLGQTASLLLKEAQLNPLPSLVPPSSLAQQPTTQEASSTQIQWPSGRTPSGFLTNKLKFNAKDEDASMKTDSYSAKKKALTFSSSFHSRLQILDSQHSSVRKLTNTCKESLETSAVETTAESSVKHNIDTGSQFKTPSTLPTKRKFCDLKDISMFSSSGKRLNVGDQGLRSPICSSAIRKSSLQTDAVGLFTPICNQRNQQGRFTGDMVDENQYSNSNLGQMTTSSQVLNDIQPNNPERVTLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREFKYMYGGVHGNRRDRQFVYSRFRPWRTCRDDAGALLTCITFVGDSSHIAVGSHNGELKFFDSNNSNVVESFTGHQAPLTLVQSFVSGETQLLLSSSAQDVRLWEATSILGGPTHSFEGCKAARFSNSGNVFAALSAESARREILLYDVQTCQVESKLLDTFTTSTGRGHVYSLIHFNPSDSMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLDQTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFSAFRTVDAINYSDIATIPVDRCVLDFATEPTDSFVGLITMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDEDDDDDDADVDPLLGPGLGGDSGSDADDMSNDEDDDDDSVSELDEDEDGDFILDDVDFDGGPGILEIVTEGDEDDDDSQVLESLSSDDEDFVGNGFGY 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01941 996 MobiDBLite consensus disorder prediction 966 982 - -
Pste2g01941 996 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g01941 996 MobiDBLite consensus disorder prediction 49 70 - -
Pste2g01941 996 SUPERFAMILY WD40 repeat-like 578 800 IPR036322 GO:0005515
Pste2g01941 996 ProSiteProfiles LIS1 homology (LisH) motif profile. 232 264 IPR006594 GO:0005515
Pste2g01941 996 PANTHER VPRBP PROTEIN-RELATED 68 993 IPR033270 GO:0016567
Pste2g01941 996 MobiDBLite consensus disorder prediction 1 71 - -
Pste2g01941 996 MobiDBLite consensus disorder prediction 875 996 - -
Pste2g01941 996 FunFam DDB1-and CUL4-associated factor homolog 1 562 889 - -
Pste2g01941 996 SMART Lish 232 264 IPR006594 GO:0005515
Pste2g01941 996 SMART WD40_4 607 647 IPR001680 GO:0005515
Pste2g01941 996 SMART WD40_4 652 690 IPR001680 GO:0005515
Pste2g01941 996 SMART WD40_4 564 604 IPR001680 GO:0005515
Pste2g01941 996 MobiDBLite consensus disorder prediction 888 909 - -
Pste2g01941 996 Gene3D - 565 889 IPR015943 GO:0005515
Pste2g01941 996 MobiDBLite consensus disorder prediction 268 292 - -
Pste2g01941 996 MobiDBLite consensus disorder prediction 21 43 - -
Pste2g01941 996 MobiDBLite consensus disorder prediction 924 953 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01941 Pste-Chr2 19721850 19727556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01941 591 797 U-box Gene Family AT2G33340 25.778 2.79e-06 49.3