Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01937 GAGTTAGGTGGTTTTAAGGAGGTGGACCGCAATAGTGCAAAAGGAAATGGTGCAGACAAGAATTTGATTATTGGGCCTATTGTCATTAACACACCATTGGAGATAGAGGTGCGAGAGTATGGTAGGGAGATAGGAATTCTCAAGGTGAAGGGGAAGGACAGAGACCTAAAAAGGGTAGTGGCAGATCATGAGTTTGTGGATGTTGTATCAGTGAGTGGGGGGATGGCCACAAACTTGGTGGTTTGGCGTGATAAGACGAAGCACATTGGTTGTGAGACATTGGCTAGTAGTGTGTGTTCATATAGGGGCCCAGGTGGTGTGAGGTCTGGGGATAATAATAATAATGGTGATCTTGTGACTAACCTGCCTGGCCAGCCTCCTGTAGATTTCCAGCACTACGCAGGATATGTGACTGTCAATGAAACCAATGGACGAGCACTGTTTTACTGGTTCTATGAGGCCATCACCAAGCCTCAGGACAAACCATTGGTGCTGTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTTGGATATGGAGCAACACAGGAGATTGGCCCATTTTTAGTGGACACTGATGGCGAGAACCTCAAATTTAATAACTTCTCTTGGAACAAAGAGGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTATTCAAATACAACCAGCGAATATGCACAACTGGGAGATGACTTCACAGCTAATGATACTTATACTTTTCTGCACAATTGGTTCCTCAAGTTTCCATCATACAGAACAAGGACATTTTACATAGCAGGAGAGAGCTATGCAGGAAAGTATATACCAGAGCTGGCCGAACTCATCCACGATAGAAACAAGGACCCTTCCCTTCACATTGATCTCAAAGGAATTTTGCTGGGCAACCCTGAAACATCCGATGCTGAGGACTGGTCAGGTATGGTTGATTATGCTTGGAGCCATGCAGTGATATCCGATGAAACATACCAAACAATTAAAGCAAGCTGTGACTTCTATAGCAGTGACCCGTGGAGTAATAAAAGTTGTACTCAAGGAGTGGATGAAGTACTCAAACAGTACAATGAAATTGATATTTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCGCGTTCAAACTATCAATTGATGCAAACAGTAATGCATCCCTCATTTAAAATGATGCCACGGATCATGGGCGGTTATGACCCATGTTTGGATAACTATGCTAAAACTTTCTATAATAGACCAGATGTTCAGAAGGCACTCCATGCTAGTGACGGTCACAATATGAGGAATTGGAGTATTTGCAATCATAGCATATTCAAGGGCTGGGCACAATCAAAGCCTTCTGTTATCCCAATCTACAGGAAGCTTATATCAGCAGGACTTAGGATATGGGTTTACAGTGGAGACACTGATGGTAGGGTGCCAGTGCTGTCAACAAGATACAGCTTAAGTAGTCTACGTTTGCCTATCACTAAGAGATGGAGGCCTTGGTACCATCAAAAGGAGGCTAGTGGATGGTATCAAGAATATGAAGGGCTTACATTTGCGACGTTTCGAGGAGCTGGCCATGCAGTGCCTTGTTTCAAACCAAGCAACTCCCTTGCATTCTTCTCCTCCTTTCTTCGTGGAGAATCACCACCGTCTACAAAATAA 1656 0.4426 ELGGFKEVDRNSAKGNGADKNLIIGPIVINTPLEIEVREYGREIGILKVKGKDRDLKRVVADHEFVDVVSVSGGMATNLVVWRDKTKHIGCETLASSVCSYRGPGGVRSGDNNNNGDLVTNLPGQPPVDFQHYAGYVTVNETNGRALFYWFYEAITKPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGENLKFNNFSWNKEANMLFLESPVGVGFSYSNTTSEYAQLGDDFTANDTYTFLHNWFLKFPSYRTRTFYIAGESYAGKYIPELAELIHDRNKDPSLHIDLKGILLGNPETSDAEDWSGMVDYAWSHAVISDETYQTIKASCDFYSSDPWSNKSCTQGVDEVLKQYNEIDIYSLYTSVCFASTARSNYQLMQTVMHPSFKMMPRIMGGYDPCLDNYAKTFYNRPDVQKALHASDGHNMRNWSICNHSIFKGWAQSKPSVIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSSLRLPITKRWRPWYHQKEASGWYQEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLRGESPPSTK 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01937 551 Gene3D alpha/beta hydrolase 114 372 IPR029058 -
Pste2g01937 551 FunFam Carboxypeptidase 401 546 - -
Pste2g01937 551 Pfam Serine carboxypeptidase 123 544 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 Gene3D - 403 441 - -
Pste2g01937 551 PRINTS Carboxypeptidase C serine protease (S10) family signature 514 527 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 PRINTS Carboxypeptidase C serine protease (S10) family signature 212 222 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 PRINTS Carboxypeptidase C serine protease (S10) family signature 248 273 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 PRINTS Carboxypeptidase C serine protease (S10) family signature 199 211 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 119 531 IPR001563 GO:0004185|GO:0006508
Pste2g01937 551 SUPERFAMILY alpha/beta-Hydrolases 115 545 IPR029058 -
Pste2g01937 551 Gene3D - 450 544 - -
Pste2g01937 551 ProSitePatterns Serine carboxypeptidases, serine active site. 262 269 IPR018202 GO:0004185
Pste2g01937 551 FunFam Carboxypeptidase 113 372 - -
Pste2g01937 551 FunFam Carboxypeptidase 450 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01937 Pste-Chr2 19651135 19662583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01937 408 545 Calmodulin-binding Proteins AT2G22960 33.094 1.94e-14 70.1