Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01935 TACGCAACAACGTTGATAACAAGAAGTGTTGATCTGTCTCCGAGGAAGCCTAAGAATGGGCATGTCACCTCTGGTTACTCCAACCTAAGAAAATATGTCATTGCTCCCCATGACCGTACATACCAATTGTGGCAAACGTTTCTGGTGGCATTGGTGGTGTATTCTTCGTGGGCATGTCCATTCGAGCTAGCTTTCAGAGGAATGTTATTTGGGTCGCTGTTGCCAGTTAATCTCCTTGTGGATGCCTTCTTTGCTGTTGATATAATCCTTACTTTCTTTGTGGCTTATTTAGATACATCAACTTATCTCCTTGTTCATGACCATAAGAAGATTGCTCTCAGGTACGTCAAGAAGTTGCACTTCACCATGGATCTAGTCTCCACTGTGCCGTTTGAGCAGATATACCAAATTCTGACGGCCAAACCAACCAATAGTCAGGTCTTTGGTTTCCTAATTATGCTTAGACTATGGCGATTAAGGCGTGTTAGCGAACTCTTCGCAAGGCTAGAAAAAGACATAAGAATTAACTACTCAGTAACAAGATTTTGCAAACTTATAAGTGTTACGCTATTTGTCGTGCACTTCGCAGGCTGCATGTATTTTTGGTTGGCTGTTCAGCACAAAACACCCAAAAACACATGGATCGGGAACAAAACAACGGATTTTAATGACTTGAGCATCGGTTTGGGTTACACTTATTCCATGTACTGGTCTGTTACAACCTTTACCACTGTTGGCTATGGAGATTTTTATGCAGTGAATTTAACGGAGAAGCTTTTCAGTAGTTTTTACATGCTGTTTAACATCGGCCTCACTGCGTATATAATCGGAAACATGACAAATCTGTTGGTCCATAACTCTGTCCGAACCTTTGCCAGGAGGGATGCCTTCCACAAAATATTACAATATGCAAACAAAAATAAACTCCCGGAAAGCTTAAAGGAGCAAATGTTGTCACACATGCAATTGAAGTTTATGACTACAGAGTTACAGAGAGAAGTGCCACAAGACCTACCTAAAACAATAAGATCCAATATTGCTCGGCATCTTTTCGGAAACATAGTTGAAACAGCATATTTATTTAAAGGAGTTTCTGATGATTTTATAACCTTGCTGGTTTCTGACACGAAAGCTGAATACTACCCGTCTAACGTTGACATTATCTTGGAAAATGAGATGCCAACGTATTTCTACATTTTGGTATCAGGATCCCTGGATCTGTTGATATACAAGAATGGGGTTGAACAG 1248 0.4046 YATTLITRSVDLSPRKPKNGHVTSGYSNLRKYVIAPHDRTYQLWQTFLVALVVYSSWACPFELAFRGMLFGSLLPVNLLVDAFFAVDIILTFFVAYLDTSTYLLVHDHKKIALRYVKKLHFTMDLVSTVPFEQIYQILTAKPTNSQVFGFLIMLRLWRLRRVSELFARLEKDIRINYSVTRFCKLISVTLFVVHFAGCMYFWLAVQHKTPKNTWIGNKTTDFNDLSIGLGYTYSMYWSVTTFTTVGYGDFYAVNLTEKLFSSFYMLFNIGLTAYIIGNMTNLLVHNSVRTFARRDAFHKILQYANKNKLPESLKEQMLSHMQLKFMTTELQREVPQDLPKTIRSNIARHLFGNIVETAYLFKGVSDDFITLLVSDTKAEYYPSNVDIILENEMPTYFYILVSGSLDLLIYKNGVEQ 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01935 416 ProSiteProfiles cAMP/cGMP binding motif profile. 360 416 IPR000595 -
Pste2g01935 416 Pfam Ion transport protein 42 284 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g01935 416 CDD CAP_ED 360 416 IPR000595 -
Pste2g01935 416 PRINTS EAG/ELK/ERG potassium channel family signature 88 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01935 416 PRINTS EAG/ELK/ERG potassium channel family signature 77 87 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01935 416 PRINTS EAG/ELK/ERG potassium channel family signature 231 248 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01935 416 PRINTS EAG/ELK/ERG potassium channel family signature 275 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01935 416 PRINTS EAG/ELK/ERG potassium channel family signature 257 268 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01935 416 PANTHER POTASSIUM CHANNEL AKT1 23 416 IPR045319 GO:0005249|GO:0006813
Pste2g01935 416 FunFam Potassium channel KAT3 43 285 - -
Pste2g01935 416 Gene3D Jelly Rolls 331 415 IPR014710 -
Pste2g01935 416 SUPERFAMILY cAMP-binding domain-like 291 413 IPR018490 -
Pste2g01935 416 Gene3D - 41 285 - -
Pste2g01935 416 SUPERFAMILY Voltage-gated potassium channels 36 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01935 Pste-Chr2 19635985 19641826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01935 30 416 Ion Channels AT4G32650 57.216 2.17e-150 439
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01935 2 19635985 19641826 Pste2g01935 2 19635985 19641826 ECH