Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01924 GATGGGTGACGCTGAAGCAAGATATCTGACGGTGACACGTACCCTATGTATGAGCGACGTGCCCATTTGGAGGGCATTGAGGCCTATAAATTCCATTCCCATTCCGATTCTGATTCCGTTGTGAGTTGAGTTGTGCTGCTTTCTCCTCTGGAGTCGCCCACCTCTCTTCTCTCTCCTTCTTTCCCCAAATGCTTCCTACTTCCATTTTCTCTTCATTCAAACACCCATAAACTTCCATTTTCTCTTCATTCAAACACCCATAACTTCTTCTGTTCCCGCTATTCATCTCCAACAACCCTAACCCTAACCCTCCGTTTCTGGATCCACATTACGTTCTTGGAGGAGTCAACGCAGAACTGCGAATCAAGTTGGGCTCTGTGTCTGTCCTTCATGGACAATAAAATCACGACATATTATTTTGAAGACATTTGATTGAGTGATTTATTGCTTTTAACATAGGTCGGTGTGTCTATTGGTCGGCTCCAGTATAGTGGGACATGGTTCTAGGAATTATTCAAGAAATCAAGTGATCATTCAATGCTATTGGCTTTTATTTACTGCTAGAGGCTGTCAAGCACCTGCGTACTACATTGTAGTTTATGTGGAATTATTGTATATGCTCTTGTTTTGGTGTGTTCCCACTTGGAGTATTATTGATTGAAGCTGGCCAACCTTGATTCAATTTTTTTGTTGCTGCTTTCAATTGATCTTCAGAATTGTAGAAGAAAGCAACGGTCACCAGGCTTACTGCCTTCTTCTAGATAGCCTATAATTTTTCTGAAGATAGCTAGCATCATGGGAGAAGTGGCAGTAATGCACTCTGAGCCTCTGCAGTTTGAGTGCAATGATATGAAGCATGTCACTGAGAAAGATGTTTACAACCTACCATCAAATGAAGAGCCCATCCTTGGAGAAGAATCAAGTCAATCAACAAATCACATAAAGGTCAATAATTTGCGAGAGGAGGGATTTATGGAGTATGGATGTCAACATTACCGGAGAAGATGCCGCATTAGGGCCCCTTGTTGCAATGAAATTTTTGACTGCCGTCATTGCCACAATGAGGCAAAAAATAATATCGATATTGATCAGAAGCATAGACACGATATTCCCCGCCATCAAGTTAAACAGGTGATATGTTCACTTTGTGGGACTGAACAAGAGGTTCAGCAAAACTGTATTAACTGTGGTGTTTGTATGGGCAAGTACTTCTGTGGGACATGTAAGCTCTTTGATGATGACCACAAGCCAGAGTCTGCTCTCTCTACTGTGGCGAGTAGTTTGGTGATGGATGCTGAATTGATTATAAGAACTGTTGTAATTCTGACAGAACTGGAGGATCTGAAAATTTCTTCCATTGCTACAAATGTGGTAAGTAACACTCTTCGTTGTTGCTACTCAACTCAACTGAAAAACAGTCACCCTTGTGTGGAAGGAGCAATGCATCACGATTGCCCTATTTGTTTTGAGTATTTGTTTGAATCTGTGAATGATGTCACTGTTTTGCTCTGTGGACATACAATACATAAGAGCTGCCTGAAAGAAATGAGGGAACATTTCCAGTATGCATGCCCTCTCTGCTCGAAGTCAGTTTGTGATATGTCAAAGGTTTGGGAGAAATTTGACATGGAGATTGCTGCTACACCGATGCCTGAGCCATATCAAAACAAAATGGTCTGGATCCTTTGCAATGATTGTGGCAAAACTTCTCACGTCCAGTACCATCTTGTTGCTCAAAAGTGCTTGAACTGCAAATCCTACAACACACGACAAACAAGAGGCTGAGCTGCAATAATTATTTATAGGACTGCTTTTGATGCCTATGTAGGTAGTGGCAACCTAAATGTATCCTACATTGAGGAAAACGCAAGCAGGACTTTTCATTTCAACTGCAAGCAGGTCGAAACACGTCCAAGGGAAAAACGGTTTATCATGTTGATTTGGTATGGGGTAGTTTAGTTTATTGTGTTGGTTGTTTCTGGTTTTAGCTAACTAAATAATTTATATTAATCTGTTAGTGTTCCAGTGTTGGGATAATGTCACCTTTCAAGTTTGCTGGGTCACTTGATTTATTTGTATCGTGGTGCTAGGACACAAGTGAACGATGTCCTCTAATCTTAAGATTTGCGTTTAATGTAACCCTCATGTCGTCAGGACTCAATTTGAGTTTAATGATAGACAATAAAAACTAGAGAAAAAT 2200 0.4077 MGEVAVMHSEPLQFECNDMKHVTEKDVYNLPSNEEPILGEESSQSTNHIKVNNLREEGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAKNNIDIDQKHRHDIPRHQVKQVICSLCGTEQEVQQNCINCGVCMGKYFCGTCKLFDDDHKPESALSTVASSLVMDAELIIRTVVILTELEDLKISSIATNVVSNTLRCCYSTQLKNSHPCVEGAMHHDCPICFEYLFESVNDVTVLLCGHTIHKSCLKEMREHFQYACPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNKMVWILCNDCGKTSHVQYHLVAQKCLNCKSYNTRQTRG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01924 329 SMART ring_2 220 262 IPR001841 -
Pste2g01924 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 216 282 IPR013083 -
Pste2g01924 329 Pfam Zinc-ribbon 267 325 IPR039512 -
Pste2g01924 329 SUPERFAMILY CHY zinc finger-like 61 135 IPR037274 GO:0008270
Pste2g01924 329 ProSiteProfiles Zinc finger CTCHY-type profile. 135 219 IPR017921 -
Pste2g01924 329 Pfam CHY zinc finger 64 145 IPR008913 GO:0008270
Pste2g01924 329 Gene3D - 291 329 - -
Pste2g01924 329 Pfam Zinc finger, C3HC4 type (RING finger) 220 262 IPR018957 GO:0046872
Pste2g01924 329 ProSiteProfiles Zinc finger CHY-type profile. 57 133 IPR008913 GO:0008270
Pste2g01924 329 CDD RING-H2_Pirh2-like 219 263 - -
Pste2g01924 329 SUPERFAMILY RING/U-box 219 269 - -
Pste2g01924 329 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 45 328 - -
Pste2g01924 329 ProSiteProfiles Zinc finger RING-type profile. 220 263 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01924 Pste-Chr2 19565877 19570988 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01924 62 325 C2H2 Transcription Factor Family AT3G18290 34.559 3.93e-42 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01924 2 19565877 19570988 Pste2g01924 2 19565877 19570988 ECH
Pste8g00768 8 3974557 3976976 Pste2g01924 2 19565877 19570988 PCT