Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01920 AAAGAAACGAAACACAGTGCCTGTATATCTCTACTGACTCTACTCAGTATACTAATGTGTTTTGGATGATGCTACTTCCTTTCTACAATAACCATCTTAGGGCTTTTCAACTCTTCAATTCTTTTTCCACTTTTTGTTTTTCATTTACCTCTTATCCTAAGTCTCCTTCTTTCCCATTTTCTTTCTCCATATCATACTAGAGCCTTTTTAATTTTGGCCAAATTTTCTCCGCCATTTTCATTTCCCTTTATTTTTTAGCTCTGTTCCGAAAAGGGTTTATTTCCCTTTTCAAAATTACCTCGGATTCTTGGGCAAGTTCCTATATTTGTCTTGTTCTGTATTGTGTTGTCTGTTTTTAAGTTTTAAGCTTCACTAATTGCTATCGTGACTCTAGTTTTACTCCTTTGAGCAAATGGGTAGCACGAAATTGGAGTTGCATGTTGGAATCTTTGCAACCTGCATGGTGATTCTCATGGGAAGTTTCTGTGTTGGAGATACTGACATGGTTGATGTTGCTGCTATCAATAGTCTATATGTTTCTCTAGGGTCACCACCGCTTCAAGGGTGGAAACCTGTGGGAGGAGATCCATGTTTGGAACTGTGGCAAGGTGTGGCTTGTGTATTCTCCAACATAACTGCAATACACCTCGGAGGCATGGATTTGGGTGGACAACTGGGCAGCAATTTGAATTTCCCATCCATTATTGAATTGGATCTTAGCAACAACCACATTGAAGGGCCTATTCCATTTACTTTGCCCCCTACTCTGAGGAGATTGTCTCTTTCAGGAAATCGATTAAATGGAAGCATTCCAGATGCCATGTCCTTATTAACTATACTGTCAAACTTGGACTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAACAGGGAGTTTATCATCTCTTACCACATTACACTTGCAAAACAATCAACTTTCTGGAACCCTTTATGTTTTGCAAGACCTGCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTCTGGACCAATTCCTCCAAAATTGTTGAGTATTCCAAATTTCAGTAAAAATGGGAATCCATTTAATACTACTACTATTCCATCACCTCCGACTGCTGCCCCTGCACCCGTAGATATGGCCTCATCCCCCCATGAATCCCCTTGGAATGTGGCATATGGTCCTTCTACCCTGACAGCACCAGTGCCTGCAAATACTAGGAAGTCTTATATATCTAAGAGTGTGATTTGGATTGCTGCTGGTGCAGGTCTTTTAGTATTCATCGTGGTGGGAGTTTGTCTTTTAATGTTTTGGTGCATTAAGAGAAGGCCGGGGAAGAAAATTGCTAAGCAACTTGATGAGGTGGGTGTGTTTGCCGGACCTTTAAATAAACCTACACCTAGTGACTCTGATTTTGAAGCAACTAATCTAGAGGATAAAGGTAAATGGGAAGTACCAAGTAAAAGTACAAATTTGATTCCAAAGGTTAAGGATGAACAAGACATATTTGTGAAAGTAGTATCTGCAACTTCAGAATGCAACAATGGTCATGAATCCATCAACGCTGGAGGGGGTACCAAACTTTCATCCCTGCAGCCACCACCACAACACTTTCTCCCAACTAGTCCTGGTGAGAAGATCAATATCAATCCAGCTATAACTACCACAGTAACTGAAAGACAAGTTATGTCAAATTCCATCAGAGTTTATACAGTTGCATTGATTCAGCAATATACAAATAGCTTTTCCCAAGAAAACTGTATCGGGGAAGGTACACTAGGGCCTGTTTATCGAGCTGAGCTCCCTGATGGAAAGCTATTGGCAGTGAGGAAGCTGGATGCTACCGCTTCCATGGGGCATAGTCATGAACAGTTTATTCAATTGGTGTCATATATCTCTAAAATTCAGCATGCAAATATTGCTAGACTTGTAGGTTACTGTGCTGAGCATAGTCAACGACTACTTGTATATGAGTATTGCAGTAATGGGACCCTATATGATGCACTGCATGGGGATGATGATCACCGTATCAAACTTCCATGGAATGCACGCATTCGGGTGGCCCTTGGAGGTGCTAAAGCTTTAGAGTATCTTCATGAGAACTTTCAGCCACCTATTGTACATCGAAATTTTAGGTCTGCTAACGTTCTTCTGAATGAAAATTTGGAAGTGTGCATCTCTGATTGTGGATTAGGGCCATTGCTATCTTCTGGATCTACTGGTCAGTTATCAGGACGTCTCCTTACAGCTTATGGTTACAGTGCTCCAGAATTTGAGTCTGGAAGTTATACGCAGCAAAGTGATGTGTTCAGTTTCGGTGTTGTAATGCTAGAACTCCTCACTGGACGAAAATCATTTGACAAGTCAAGACCTCGTGGAGAGCAATTTTTGGTTAGATGGGCAGTTCCTCAACTCCATGACATTGATGCATTGTCAAAAATGGTTGACCCCTGCTTAAGTGGAGCCTATCCTATGAAGTCTTTGTCACGATTTGCAGATATTGTTTCTTCATGTGTACAGCGAGAACCTGAATTCCGGCCGGCAATGTCGGAAATTGTTCAAGATCTCTTGCGAATGATGTAAAAGCTATGCTTAGCTTCCTATCTATTTTTCTTTCTCTTCATCCAATTTTGTAACTCAAAGATTGTTTCCTTGTGTGTGGAAAAATGTAATTATGAAATAGTGTATACTTCATATTTTTCAGTTTTTTTGTTTTATTATCAACTTAAGTTAATAGTTAAGTATGTTGGGATCTCAGATTCACGGAATCGTCATCCACATTGGTGTATACCATATTTAAAGTATGAACCCACAAAATTGTTTC 2810 0.4007 MGSTKLELHVGIFATCMVILMGSFCVGDTDMVDVAAINSLYVSLGSPPLQGWKPVGGDPCLELWQGVACVFSNITAIHLGGMDLGGQLGSNLNFPSIIELDLSNNHIEGPIPFTLPPTLRRLSLSGNRLNGSIPDAMSLLTILSNLDLSNNNLSGQLPSSTGSLSSLTTLHLQNNQLSGTLYVLQDLPLQDLNIENNLFSGPIPPKLLSIPNFSKNGNPFNTTTIPSPPTAAPAPVDMASSPHESPWNVAYGPSTLTAPVPANTRKSYISKSVIWIAAGAGLLVFIVVGVCLLMFWCIKRRPGKKIAKQLDEVGVFAGPLNKPTPSDSDFEATNLEDKGKWEVPSKSTNLIPKVKDEQDIFVKVVSATSECNNGHESINAGGGTKLSSLQPPPQHFLPTSPGEKININPAITTTVTERQVMSNSIRVYTVALIQQYTNSFSQENCIGEGTLGPVYRAELPDGKLLAVRKLDATASMGHSHEQFIQLVSYISKIQHANIARLVGYCAEHSQRLLVYEYCSNGTLYDALHGDDDHRIKLPWNARIRVALGGAKALEYLHENFQPPIVHRNFRSANVLLNENLEVCISDCGLGPLLSSGSTGQLSGRLLTAYGYSAPEFESGSYTQQSDVFSFGVVMLELLTGRKSFDKSRPRGEQFLVRWAVPQLHDIDALSKMVDPCLSGAYPMKSLSRFADIVSSCVQREPEFRPAMSEIVQDLLRMM 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01920 718 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 407 517 - -
Pste2g01920 718 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 716 IPR046959 -
Pste2g01920 718 PRINTS Leucine-rich repeat signature 143 156 - -
Pste2g01920 718 PRINTS Leucine-rich repeat signature 164 177 - -
Pste2g01920 718 Pfam Protein tyrosine and serine/threonine kinase 443 714 IPR001245 GO:0004672|GO:0006468
Pste2g01920 718 Gene3D Transferase(Phosphotransferase) domain 1 518 718 - -
Pste2g01920 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 518 718 - -
Pste2g01920 718 SUPERFAMILY L domain-like 64 227 - -
Pste2g01920 718 Gene3D Ribonuclease Inhibitor 33 229 IPR032675 -
Pste2g01920 718 Gene3D Phosphorylase Kinase; domain 1 405 517 - -
Pste2g01920 718 ProSiteProfiles Protein kinase domain profile. 440 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01920 718 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 146 - -
Pste2g01920 718 SUPERFAMILY Protein kinase-like (PK-like) 419 714 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01920 Pste-Chr2 19530557 19537640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01920 19 718 Strubbelig Receptor Gene Family AT4G03390 49.666 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pste2g01920 PK_Tyr_Ser-Thr 2.6e-40 CL0016