Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01909 TCCTCCTACCCGAAGGATTGCAAAATATTCCTTAAGCCACACACAACCACAACCACAACCACCGCAAAGGCAATTCGAGTTGAACCTAAACCTGAACCTGAATCTAGGGTTGTTCCTATTGGATCTCGCATTCTCGGACCCAACAATCCGAAGCCGGAAAAGAAAATGCACGTGAAATCGGCGCAGTCATCGTTCCGGGATCGGACACAGGAATTCCACAGCATCACAGAGAGGTTGAAGAAGTCTGGATCAGGGCCCAATGGGCCCAGTAGTAGCAGTTCTTCCAGATCGGAGGAACAGCAATCCGCGATCGCGAACCAATCAGAGTTCAATCGAAGGGCCTCAAAAATTGGCTACGGGATTCACCAAACGTCTCAGAAGCTCGCCAAGCTCGCCAAGTTGGCAAAAAGGACTTCGGTTTTTGATGACCCCACCATGGAAATTCAAGAGATTACGGGTGTTATTAAGCAGGATATTACTGCTCTGAACTCTGCGGTGAAATGGAGTGGAAATGTTTCTGCCGACACGACCAGCCATTCGAGCACCGTGGTTGATGATTTGAAGACACGCTTGATGAGCACCACCAAAGAGTTTAAGGATGTTCTCACCATGAGAACTGAGAACATGAAAATGCACGAGAATAGAAGACAGTTGTTTTCGTCTTCTGCTACTAAGGATTCCGCCAATCCTTTTATCCGGCAGAGGCCATTGGCTGCAAGGGCGGCAGCTGGTACTTCTAATGCTCCTGCTCCTCCGTGGGCTAATGGATCACCATCTTCATCTCCAGTGTTTCCCAAGAAGCAAGTGGATGGGGAGAGTCAACCATTGTTGCAACAACAACAGCAGCAGCAGCAGGAGGTAGTTCCATATCAAGACAGCTACATGCAAAGCAGAGCTGAGGCACTTCAGAATGTTGAGTCCACTATTCATGAGCTTAGCAACATTTTTAATCAGTTAGCGACACTTGTCTCCCAACAAGGAGAGATTGCGATCAGGATTGATGAAAACATGGATGATACATTGGCTAACGTAGAGGGGGCACAAGGGGCTCTGTTGAAGTATCTGAGCAGCATATCTTCCAACAGGGTTTTTCCCTTTCCCTCTTTCCGGCTTCCGCTTCACGGATCTCGCATCGGTGTCTCATACATTCGCAAAATGCACACCAAATCGGCGCAGTTGTCATTTCGGGATCGGACGCACGAATTCTGGAGCATTGCCGAGAGGTTGAAGAAGACTGTATCAGCTCCGAATGGACAAAACAGTAGTTCCTCCAGATCGGAGGAACAGCGATCCGCGATTGCAAATCAATCGGATTTCAATAGAAGAGCTTCCAAAATTGGCTTCGGAATTCACCAAACGTCTCAGAAATTGGCCAAGCTCGCCAAGTTGGCCAAGAGAACTTCGGTTTTCGATGACCCTACCATGGAAATTCAAGAGCTTACGGGGGTTATTAAGCAAGATATCACTGCTCTAAACTCTGCGGTTGTGGATCTTCAGTTACTGTGCAACTCTCGGAGCGAGAGTGGGAACGCTTCTACCGACACCGCTAGCCATTCAACCACGGTTGTTGATGACCTAAAGACGCGGTTGATGAGCACCACTAAAGAGTTTAAAGATGTTCTCACCATCAGAACTGAGAACTTGAAAGTGCATGAGAATAGAAGACAGATGTTTTCCTCCACTGCTTCTAAGGATTCTGCAAATCCTTTTGTCCGGCAACGGCCGTTGGCTACAAGGTCGGCTGCTAGTACTTCCAATGCTCCCGCTCCACCATGGGCTACCGGGTCATCTTCATCTCAGTTGTTTCCTAAGAAGCAGGTGGATGGGGAGAGTCAACCGTTGCTGCAACAACAGCAGCAGCAACAGGAGATGGTTCCGTTACAAGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAGAATGTTGAGTCCACTATTCATGAGCTTAGCAACATCTTTAATCAACTAGCAACACTTGTTTCTCAACAAGGAGAGATTGCCATCAGAATTGATGAAAATATGGATGATACATTGGCAAACGTAGAGGGGGCGCAAGGGGCTCTATTGAAGTATCTGAACAGCATATCTTCTAATAGGTGGCTGATGATCAAGATTTTCTTTTCTAATGACAGAAATGAAAACGAGGACACAGATGATGCCCTATCTTGTGACAAGTCTTTTGTATTTCAT 2190 0.4708 SSYPKDCKIFLKPHTTTTTTTAKAIRVEPKPEPESRVVPIGSRILGPNNPKPEKKMHVKSAQSSFRDRTQEFHSITERLKKSGSGPNGPSSSSSSRSEEQQSAIANQSEFNRRASKIGYGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQEITGVIKQDITALNSAVKWSGNVSADTTSHSSTVVDDLKTRLMSTTKEFKDVLTMRTENMKMHENRRQLFSSSATKDSANPFIRQRPLAARAAAGTSNAPAPPWANGSPSSSPVFPKKQVDGESQPLLQQQQQQQQEVVPYQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLSSISSNRVFPFPSFRLPLHGSRIGVSYIRKMHTKSAQLSFRDRTHEFWSIAERLKKTVSAPNGQNSSSSRSEEQRSAIANQSDFNRRASKIGFGIHQTSQKLAKLAKLAKRTSVFDDPTMEIQELTGVIKQDITALNSAVVDLQLLCNSRSESGNASTDTASHSTTVVDDLKTRLMSTTKEFKDVLTIRTENLKVHENRRQMFSSTASKDSANPFVRQRPLATRSAASTSNAPAPPWATGSSSSQLFPKKQVDGESQPLLQQQQQQQEMVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFSNDRNENEDTDDALSCDKSFVFH 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01909 730 Pfam SNARE domain 665 706 IPR000727 -
Pste2g01909 730 SUPERFAMILY t-snare proteins 436 684 IPR010989 GO:0016020|GO:0016192
Pste2g01909 730 CDD SNARE_syntaxin5 295 362 - -
Pste2g01909 730 Gene3D - 434 684 - -
Pste2g01909 730 Gene3D - 103 347 - -
Pste2g01909 730 MobiDBLite consensus disorder prediction 239 288 - -
Pste2g01909 730 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 629 691 IPR000727 -
Pste2g01909 730 ProSitePatterns Syntaxin / epimorphin family signature. 298 337 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pste2g01909 730 PANTHER SYNTAXIN 432 703 IPR045242 -
Pste2g01909 730 MobiDBLite consensus disorder prediction 14 106 - -
Pste2g01909 730 SUPERFAMILY t-snare proteins 107 347 IPR010989 GO:0016020|GO:0016192
Pste2g01909 730 MobiDBLite consensus disorder prediction 414 436 - -
Pste2g01909 730 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 394 412 IPR021538 -
Pste2g01909 730 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 62 81 IPR021538 -
Pste2g01909 730 MobiDBLite consensus disorder prediction 50 78 - -
Pste2g01909 730 CDD SNARE_syntaxin5 632 707 - -
Pste2g01909 730 ProSitePatterns Syntaxin / epimorphin family signature. 635 674 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pste2g01909 730 MobiDBLite consensus disorder prediction 577 625 - -
Pste2g01909 730 MobiDBLite consensus disorder prediction 80 106 - -
Pste2g01909 730 SMART tSNARE_6 287 354 IPR000727 -
Pste2g01909 730 SMART tSNARE_6 624 691 IPR000727 -
Pste2g01909 730 MobiDBLite consensus disorder prediction 250 288 - -
Pste2g01909 730 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 292 354 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01909 Pste-Chr2 19425029 19442927 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01909 386 707 SNARE and Associated Proteins AT3G24350 62.784 3.14e-130 389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01909 2 19425029 19442927 Pste2g01909 2 19425029 19442927 ECH