Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01897 CTCACTAGTTACGCACGCCCTTACTTTCTCTCTCTAAAACCCTCTTAGTTTTCTCTGTCACAAATTTGTAGATCAGGCCGCACCAACCGTTGCGGTTGTGGATTCCTTGGGGTTCAGAGCCGCTATGGCTTCGGCTTCCTCTTCGTCCTCCAAACTATGCTTCAATTCCGACTGCAAAGAATTGAAGCCCGAAAGACCTAAGAAAGGTTGGAGACTTCGTAGCGGAGAACTAGCCGAGCTTTGTGATCGATGCGGCTCTGCTTTTGAAGACGGGAGGTTTTGTGAGATTTTTCACTCAAATGCTTCTGGTTGGAGGAGTTGTGAGACTTGTAGAAAGCGGATTCATTGTGGGTGTATTGTTTCAAGTCACGCCTTTATGTTGTTGGATCCTGGAGGGATTGAATGTTATGCATGTGCCCGCAAAAATATTATTTTGCCATCTAACCTGCCATGGCCACAATCTTTTTCCCTTCAAAATCGTTTATCGGATAGAATTAGAGACTTATCTGCCAAAGGTTGGAGTCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCTGCTTCTTCATCTGACCTGATGCCAGAGGTGCCTTCTTTAGTTGAATTATCTAATAGCTTTGACAAAATGTATTGCAATGAAAGGTTACCTGCCTCAGCCTTGGAAAAGAAAAATGAGGATTTGTCTGGAATATCAGTTAATTGGAATGTCAAGCTTGGCTCACGGGAGATGATGCTTATGAATGGGATGAGGAATGAGGACAAATCAAGTTCATGTTTAAATATGTGTCAACAGCCTCCTTCTCTGAAGGAAGAGTCTCAACCATTTGGTTTGCCCGTACCTAATTCATGTCAAAATGAAAGGAATGGTCAACTTGGGGTGGCTGGAAGTCACCCACAACAAACTCCACCACCTCCAGGAAAGCAATTTAATGGTGCTATGCATTTAGCATCTGACACATCAGGTGAGGCTCAGGTTCGCAATGGGCGGCCTCGAGCAGATGCCCGAGGAAGAAACCAGTTACTGCCACGGTACTGGCCCAGGTGTACTGATCTGGAGCTACAGCAAATATCTATAGATTCAAATTCTGTAATTACTCCCTTGTTTCAAAAAACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCCAAAAAATGTGCTGAGACCTACTTTCCACCAATTTCTCAGCCTGAAGGTTTGCCACTTAAAATCCTCGATGCAAAAGGCAAGGAATGGATATTCCAATTTCGCTTCTGGCCTAACAATAACAGCAGAATATTGGAGCCAGAGGGAAGGTTGGTTATGGGATTTAGAAAGGCTTCTAGTGCTGTGCCATCTGATCAGGACAATGAAACCAATAAGACTGGAAATGGATTTTCTGCACATGGTGAAGTTGAATTAGCTGATCCTAATTCATGGTCTAAAGTTGATAAGTCAGGATACATAGCAAAAGAAGCACTGGGGAGCAAATCGTTAATCTCTAGAAAACGAAAGAGCGGCATGTTGGGCTCAAAGAGTAAACGTCTAAGAATTGAAAATGAGGATTTAATAGAGCTAAAGATTACATGGCAAGAAGCCCAAGGTCTGCTTAGGCCGCCTCCCAGTCATGTTCCAAGCATAGTAGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGAAGCTCCAGTGCTTGGGAAGCCAACAATTTTTATCAGTGATAATGTGGGCAATGATCTTTGTGTTAGTGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTTTCAAGTGGCGCAAATTGCCAGCAAGTGCGCTTCTTCCATCAAAATGGACGTGCTCTGATAATTCGTGGGATCCAGAAAGGTCTTCTTGTTCAGCTGCCCAAGAGCTGACAGCCGAGCAACTTGAGAATTTGCTACCTCCTTGTAATTCAGCTGTTCCCAAGAAAATGAAGGCTACCAAACAGGATCCTGATAATCCTGAAGCTTTGGAGGGACTTGACACCCTTGCAAATCTAGCTATCCTAGGAGAGGGTGAGGCACTCCCAGCATCCGCCCAGGCCACAACTAAACACCCACGTCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCCAGTGGAAAGGGCCCTAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCGACGTTTTCGTACCCTTATGTTACGGCGTGAGAAGAAACAATCTGAAAAAGAAGCAGAGACAACTCGTAAAAAGCAACAGCAGCAACATCCTCAACCATTACCTTCATCTGAAATTTTGCTTGATGAAGATTCCTTGCCCTGTAGTAACACAGGTGATAGTAGCCCGAACCAGAACAAAGAGGGTAATGATGGTTCTGATGATGATCCTAACCGAATAAAATCATCTGCTTCGCCATTCAAAGGCCAAATTGACCTAAATATCCAGCCAGAGAGGGAAGAAGAATTATCACCTGGTTCAGATTCTGGTGGCATGATGAAGTTGCTACATGATGCTACTGAGAGGTATCTCAAGCAGCAGACTGTAAACTCTGGTACTGGAGATTCATCAGGCAGTCAGTCACAGCTGGTAGGAGATGCAATGAGAGAAGATAAACTTAGCAATGGCATTACCCATGGCAGTAGTAGCCATAATACGGACAAGGAACATGCCCAATCTTTGTCTATGAATGTGTGAAAATCATATTGGCGCTGGCCATAATTGATATGTTCTTGCAAAGCTATATTGAAGTGGGGAAAGATTTTGCTGTACATTTTATCCACTTCGGCTTCTTGCTTTTTCATGTTTGTACATAAAGAGGGGTAGGAAAAAAATTGTGAGAAACCAATGTATTCTGGTAATATATGTGGGCATCATAGTGGTTTGTGTAGGAAAACTATGAAATGCAGCTGAATGGGGTAATAGGTCGAAGCTGTTTAGTTTCTTTTGAGAGCTCACCGTGCCACCTGATTTCAACAACGTTGAAAATGTAACTAAGCCTAATTTGTTCTCCCAATTTATTCTTAGCCTGTAAGATGTTCATACTTTTTAGTAACTGCAAGTTCTGCTCGCTGTTCCCCTTGATTG 3094 0.4347 MASASSSSSKLCFNSDCKELKPERPKKGWRLRSGELAELCDRCGSAFEDGRFCEIFHSNASGWRSCETCRKRIHCGCIVSSHAFMLLDPGGIECYACARKNIILPSNLPWPQSFSLQNRLSDRIRDLSAKGWSQLAGSGPVPWKQAPSLFNSASSSDLMPEVPSLVELSNSFDKMYCNERLPASALEKKNEDLSGISVNWNVKLGSREMMLMNGMRNEDKSSSCLNMCQQPPSLKEESQPFGLPVPNSCQNERNGQLGVAGSHPQQTPPPPGKQFNGAMHLASDTSGEAQVRNGRPRADARGRNQLLPRYWPRCTDLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRILEPEGRLVMGFRKASSAVPSDQDNETNKTGNGFSAHGEVELADPNSWSKVDKSGYIAKEALGSKSLISRKRKSGMLGSKSKRLRIENEDLIELKITWQEAQGLLRPPPSHVPSIVVIEGFEFEEYEEAPVLGKPTIFISDNVGNDLCVSEKIQWAQCEDCFKWRKLPASALLPSKWTCSDNSWDPERSSCSAAQELTAEQLENLLPPCNSAVPKKMKATKQDPDNPEALEGLDTLANLAILGEGEALPASAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEKEAETTRKKQQQQHPQPLPSSEILLDEDSLPCSNTGDSSPNQNKEGNDGSDDDPNRIKSSASPFKGQIDLNIQPEREEELSPGSDSGGMMKLLHDATERYLKQQTVNSGTGDSSGSQSQLVGDAMREDKLSNGITHGSSSHNTDKEHAQSLSMNV 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01897 859 SUPERFAMILY DNA-binding pseudobarrel domain 331 396 IPR015300 -
Pste2g01897 859 ProSiteProfiles Zinc finger CW-type profile. 543 593 IPR011124 GO:0008270
Pste2g01897 859 MobiDBLite consensus disorder prediction 836 859 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 222 236 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 697 713 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 412 428 - -
Pste2g01897 859 Coils Coil 697 717 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 409 433 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 222 276 - -
Pste2g01897 859 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 9 818 - -
Pste2g01897 859 MobiDBLite consensus disorder prediction 243 263 - -
Pste2g01897 859 Gene3D - 312 413 IPR015300 -
Pste2g01897 859 Pfam B3 DNA binding domain 334 394 IPR003340 GO:0003677
Pste2g01897 859 CDD B3_DNA 332 396 IPR003340 GO:0003677
Pste2g01897 859 MobiDBLite consensus disorder prediction 804 825 - -
Pste2g01897 859 Pfam CW-type Zinc Finger 548 590 IPR011124 GO:0008270
Pste2g01897 859 MobiDBLite consensus disorder prediction 697 859 - -
Pste2g01897 859 Gene3D - 547 600 - -
Pste2g01897 859 SMART B3_2 334 431 IPR003340 GO:0003677
Pste2g01897 859 MobiDBLite consensus disorder prediction 731 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01897 Pste-Chr2 19335507 19347213 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01897 265 701 B3 DNA Binding Superfamily AT4G32010 49.784 3.45e-137 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pste2g01897 B3 2.2e-07 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01897 2 19335507 19347213 Pste2g01897 2 19335507 19347213 ECH