LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste2g01894	CTCACACCGTTAGGCTTTAGCCCAGGCAAATCTCAAAACGCGAAAGAAGTGTGTCCGGTTGTTAACATTAGCATCGAAACGCAGAGAAAATTCGACGAAATTTCTCTGATTCTTTGCCTTTTTTTTTTCCAGAAGATTTTCAACTTTCTGCTTTTCTATCCGCTTGCGTTGCATCGAATCCGTCACAGTTACAATTTGTTTTGCTTTCTTTCTCCTTTTTAAAAGGATTTGACGAGTGGCGAGAAAATCAAGCAGCACAGTCCGTTTGGTTGCTGAGAAAACGAAGAAAGAGTAGTGCGCTACTGTGACTGTGAGGTTCTTTTCTTTCACTTTCTCTGTAGGCAAAACGGTGAGAATAATGCAGACGAGGTTCATGGAGAGATCGAGCAGCACGGCGAGGGAGAAGCGTGCCTTAGATTCAGGTTCCGCGGAACAAAATCAACCTGAAAGAAAGCGACCTGCTCTCTCTAGTGTAATTGTTGAAGCCCTGAAGATGGACAGTTTGCAGAAACTTTGTTCATCACTAGAGCCTATTCTTCGTAGAGTTGATGGTAGGCCTTGGCTATATCGGATATCTTCTCCCAAGAGCATAGAAGGGCCTATTGACAGTAGTCTACAATTACAATTCAGGTCTAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGAGAGCATGGCAGCGCCATACACATTGTTTTGATTGATACAAACACAGGCCATTTTGTTACATCTGGTCCAGCTTCATGTGTCAAACTTGATGTTATTGTACTTGAAGGAGATTTCAGTAATGAGGATGATGATAATTGGAGTGAAGAAGATTTTGATAGTCATGTAGTTAAGGAGCGAGAAGGAAAAAGACCTCTTCTGACTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGGTCAGCTAATATTCACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTGAAAGTTTCCCCAGGTAGTTATGAGGGAATGCGTATTCGTGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAGCACTATCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGTTCCTTTCACAAAAGACTAAATAAAGCAGGAATTTATACAGTTGAAGATGTCGTTGGACTTGTGGTCAGAGATCCACAGAGATTGCGGAATATTCTTGGAAGTGGCATGTCAAACAAAATGTGGGATGTTCTTCTTGAGCATGCAAAGACTTGCGTTCTAAGTGGAAAACTCTATGTATACTATCCTGACGATGCAAGGAAAGTTGGTGTTGTTTTCAACAACATCTATGAGTTGAGTGGTTTAATTACCAATGACCAATATTACTCTGCCGATTCTCTCTGTAACAGTCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTATTGAGTATGACGGCAAGTCTCTGCTAAATTACAATCAGAATAAAACTTTGGGCACCTCCCAACCTCTGGCTCCAATGGTTTCCCATGATTATTCAATTTCAAATGCACTAGATCAGCAAACCTCCATCCCAAGTGTACCAGTTCCTGTACCTACAGGGAAAATCAATCCAGGAGTAACAGTTGATGCTTATCATAATGGTACGACTACCAGATGCTCAATGCAACCACAGAATGACAATATTCATTCTTCTATTCAATTTGATAACACTGCATTCTCACAGCAAAACAAACTAATGAGTGCTTTACACCAATCTCAACTTCCAAGAAATGAAAATGGGCTGACTCTTGGTACACGACAATCAGCCACTCCCGGCTTTCAGAATGTCAGCATTTCAAATGCTACTTATAGAGGATTTGAGGACTACTTCCCAGAGGAGGATATTCGAACTAGAAGTCACGAGATGCTTGAAAATGAAGATATGCAGCATCTGCTCCGTATATTTAATATGGGAGGAAGGCAATCTCATGCTTCCTTTAATACTCCTGAAGATCCATACCCTTATTCATCTGCTTACATGCCCGTGGCCTCCACGAGCTACAACTTAGATGATGAACAAAACCGTTCCTCCGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCTGCTAAGAGACGGGCACAACTTGTTGAGTTAGATGACCCATAGAATATGAAATCAGAACCATCTCACGTGTTATGATGTGAGCTATAACTTTTGCTTTTGCATTTAGCACATCAAATACAACTTACTGGTACTCAGAATACCTATCATTTTGAGGTTTTATAGCATGACTGCAAGAGTAGACATGAAACCTGGATTGAATTATTTGGTGCAGCCCTAACTTAAAAGCTCCTACTGTGGCTTCATAAACAGTTGTGCAGCAACCTCTGCCTGTACAGGATGTCACCCTGCAACAACTCTTGTATCTGTTTTACTTGTGATGTTTTTTCTAGTCTATATTCTTGCCTGCAAATTGTGAAGACCTAGCAGTTTACCACCAGGTTTAACCTAAGTCTCTGCAGTGACTTGAACGGGGTCGTTTCTTTGCATTCAGCAGGATGTACTGAATTTTGTTAGCTAGACGCATTGGTTCTAACTGGTTGGCTTTGTGTGTAGTTTCCTAGGGGTACAATAATTATAATATATACCGAATTGCTGAATTTTGGGAAGGAACCACCGAATTGCTGAATTTGAAACTGCTATTATTAGTTACCGG	2777	0.4192	MQTRFMERSSSTAREKRALDSGSAEQNQPERKRPALSSVIVEALKMDSLQKLCSSLEPILRRVDGRPWLYRISSPKSIEGPIDSSLQLQFRSRLSLPLFTGGKVEGEHGSAIHIVLIDTNTGHFVTSGPASCVKLDVIVLEGDFSNEDDDNWSEEDFDSHVVKEREGKRPLLTGDLQVTLKEGVGTLGQLIFTDNSSWIRSRKFRLGLKVSPGSYEGMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDVVGLVVRDPQRLRNILGSGMSNKMWDVLLEHAKTCVLSGKLYVYYPDDARKVGVVFNNIYELSGLITNDQYYSADSLCNSQKVYVDTLVKKAYENWMHVIEYDGKSLLNYNQNKTLGTSQPLAPMVSHDYSISNALDQQTSIPSVPVPVPTGKINPGVTVDAYHNGTTTRCSMQPQNDNIHSSIQFDNTAFSQQNKLMSALHQSQLPRNENGLTLGTRQSATPGFQNVSISNATYRGFEDYFPEEDIRTRSHEMLENEDMQHLLRIFNMGGRQSHASFNTPEDPYPYSSAYMPVASTSYNLDDEQNRSSGKAVVGWLKLKAALRWGIFIRKRAAKRRAQLVELDDP	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste2g01894	622	MobiDBLite	consensus disorder prediction	1	34	-	-
	Pste2g01894	622	Pfam	Calmodulin binding protein central domain	245	311	IPR046830	-
	Pste2g01894	622	PANTHER	OS02G0177800 PROTEIN	14	536	IPR012416	GO:0005516
	Pste2g01894	622	Pfam	Calmodulin binding protein-like N-terminal domain	86	233	IPR046831	-
	Pste2g01894	622	Pfam	Calmodulin binding protein C-terminal domain	316	378	IPR046829	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste2g01894	Pste-Chr2	19290600	19296991	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste2g01894	1	621	Calmodulin-binding Proteins	AT2G18750	57.846	0.0	702

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste3g03678	3	29058278	29062361	Pste2g01894	2	19290600	19296991	PCT