Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01885 CACATTCCCATTATTTTTGGCTCTCTCTTTTCTCTTCCAGGAACTTGGGACACGTACATTTTGGCTGTGACAAAAATAAAAATGTCCACTGTCACTTTCTTCCACCGTCTCGCCGCTCACAATCCCTCGCATCTTAAGCTTCTGCTGCTCTGCACAGCCGTAAGTGTTGCACCTGAAGAGGCAGTTACCGAGAAGAAAAAGGTTGTAGTGCTTGGAACTGGATGGGCGGCCACAAGTTTCTTGAAGAATCTGAACAATCCGAAATATGAGATTCAAGTGGTTTCGCCTCGTAACTATTTCGCATTCACTCCTTTGCTGCCTAGCGTTACGTGCGGCACCGTCGAAGCGCGCAGCATTGTGGAGCCAGTTCGCAACATTTTTAAGAAGCAGAAAAAGGTGGACGTACTGTTCAGTGAAGCAGAATGTTTCAAGGTTGATGCAGAAAATAGGAAAGTTTACTGCCGATCTAGTGTGAACAATAATTTGAATGGGAAAGATTCGAAAGAAGAATTTGTTCTGGATTATGACTATCTAATAATCGCCGTAGGCGCCAATGTCAACACATTTAATACTCCTGGAGTAATGGAGAATTGCCATTTTTTGAAGGAAGTTGAAGATGCTCAAAGGATTAGAAGAACAGTTATCGATTGCTTCGAGAGAGCAAATTTGCCCGATTTAAGTGAAGACGAGAAGAAGAGAATTCTTCATTTCGCTATTGTTGGAGGTGGTCCTACTGGAGTAGAGTTTGCAGCCTCACTTTATGATTTTGTCAATGAGGATCTGGTCCGTTTATATCCTGGGATAAAAGATTTAGTGAAAATTACAATTCTGGAGGCCGGAGATCATATCTTGGGCATGTTTGACAAGAGAATCACTGCTTTTGCTGAAGACAAGTTTCGACGAGATGGGATTGACGTTAAAACGGGATCCATGGTTGTCAAGGTGTCTGAGAAAGAAATTTCAACCAAAGAGCTGAAAAATGGAGGAGAGGTTAAGACAATTCCTTATGGAATGGCTGTCTGGTCAACTGGTATTGGCACTCGTCCATTTATTAAAGATTTTATGACACAGATTGGTCAGACTAGCAGGCGTGCGCTAGCTACAGATGAATGGTTGAGAGTTGAAGGGTGCAACAATGTGTATGCGCTCGGTGATTGTGCTACGATAAACCAGCGAAAAGTCATGGAAGATATTGCAGCGATATTTAAGAAGGCTGACAAAGACAATTCTGGAACACTTACCGTCAAAGAATTTCAAGAGGTCATAAAAGATATCTGTGAAAGATACCCACAGGTTGAGCTATATCTGAAGAATAAACAAATGTGCGACATAGCTGATTTATTGAAGGAAGCCAAGGGAGATAATAAAAAAGAATCAATTGAACTGAATATCGAAGAACTCAAAACAGCACTTTCCAAAGTGGATTCTCAGATGAAATTTCTTCCTGCAACAGCCCAGGTTGCATCTCAGCAAGGCACTTACCTGGCCAAGTGTTTTAACCGGGTGGAAGAGTGTGAAAACAATCCAGAGGGTCCTCTCAGGTTCAGGGGAGAAGGTCGCCATCGGTTCAAACCCTTCAGGTACAAGCATTTAGGTCAATTCGCCCCTTTGGGAGGAGAGCAGACAGCTGCCCAGCTTCCTGGAGATTGGGTTTCAATTGGCCATAGCAGTCAATGGCTATGGTATTCTGTCTATGCAAGCAAGCAAGTAAGCTGGCGTACAAGAGCGTTGGTTGTTTCAGACTGGACAAGACGTTTTATTTTTGGAAGGGACTCCAGTAGCATCTGAGGGAATTGAACATCTTTCACAGTCTTGCATTGGCAGTGTAGCAGAGCTCATTGATCATAAATTTCATATAGAAAAATTGTTTCGATTCCATTAATTCTTTGAATAAGTAAGGAAGCAGACTCCCAGCCCTTCAAATTTTTCGAACTCATTACGCACGACACAGGTTGTTGAATCCTCACCCCCGAGTCCCCATTTTCTATTAGAGACGTGCCATTAGTTGGTTTTCAAGTTTTGCACATTAACTTTGTTCTCATACCTAATCATTCTTCTTTTTATGATTAATCTTTTGTTCTTCTTTCCAATCTTGCCTAGGGAATTGACTGCAACTAAGTTGAATCTTTCCTCGTAATAAGAAAATATTATATACCTG 2158 0.4189 MSTVTFFHRLAAHNPSHLKLLLLCTAVSVAPEEAVTEKKKVVVLGTGWAATSFLKNLNNPKYEIQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFKKQKKVDVLFSEAECFKVDAENRKVYCRSSVNNNLNGKDSKEEFVLDYDYLIIAVGANVNTFNTPGVMENCHFLKEVEDAQRIRRTVIDCFERANLPDLSEDEKKRILHFAIVGGGPTGVEFAASLYDFVNEDLVRLYPGIKDLVKITILEAGDHILGMFDKRITAFAEDKFRRDGIDVKTGSMVVKVSEKEISTKELKNGGEVKTIPYGMAVWSTGIGTRPFIKDFMTQIGQTSRRALATDEWLRVEGCNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKQMCDIADLLKEAKGDNKKESIELNIEELKTALSKVDSQMKFLPATAQVASQQGTYLAKCFNRVEECENNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSSI 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01885 568 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 412 567 - -
Pste2g01885 568 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 29 395 - -
Pste2g01885 568 Gene3D - 29 411 - -
Pste2g01885 568 Gene3D - 412 567 - -
Pste2g01885 568 CDD EFh 370 445 IPR002048 GO:0005509
Pste2g01885 568 SUPERFAMILY FAD/NAD(P)-binding domain 38 261 IPR036188 -
Pste2g01885 568 Pfam Pyridine nucleotide-disulphide oxidoreductase 39 368 IPR023753 GO:0016491
Pste2g01885 568 SUPERFAMILY FAD/NAD(P)-binding domain 209 363 IPR036188 -
Pste2g01885 568 SUPERFAMILY EF-hand 359 455 IPR011992 -
Pste2g01885 568 Coils Coil 430 450 - -
Pste2g01885 568 SMART efh_1 370 398 IPR002048 GO:0005509
Pste2g01885 568 ProSiteProfiles EF-hand calcium-binding domain profile. 366 401 IPR002048 GO:0005509
Pste2g01885 568 PANTHER NADH DEHYDROGENASE 32 568 IPR045024 GO:0003954|GO:0006116
Pste2g01885 568 Pfam EF hand 371 397 IPR002048 GO:0005509
Pste2g01885 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 148 166 - -
Pste2g01885 568 PRINTS FAD-dependent pyridine nucleotide reductase signature 209 227 - -
Pste2g01885 568 ProSitePatterns EF-hand calcium-binding domain. 379 391 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01885 Pste-Chr2 19219062 19224076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01885 1 568 Chloroplast and Mitochondria Gene Families AT4G21490 72.014 0.0 840
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03655 3 28807829 28813715 Pste2g01885 2 19219062 19224076 PCT