Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01878 CTCACTCACGCTCCTCTCTTCTTATTCTTATATCTCTCTACTCACTCTCACTCTCAAACCCAACACACTTCGCTTTTCTCATACCATTCAAAGGTATGAGCAAGGTTTTCATTTGAAACAATTGGGTTGCTCTTCTTCGAGGCACGCATATATAATGGACAAAACAAATAAAGTTTGTGCCAAAGATGAAGAGCGTCCACTGCGAATCACCAGAGCAAGAGCTAGAGCCTTGAGAGGGATTCCTCCCTATGCAAGACCAAAAAATGATCCAAAAAACGTGCTTCGAGCAAATGCCAAAAGAACAGCAATTTCTGAAAACAAGACTTCTGTGGTTGTTCCTGCTGTAATCCAGTGTAAGGGAAGGACGGTGCTTACAGATGTAACAAACAAGTGTGCACCCTCACAAGATAAGTTCACTAAGGCATCAAAATTTCAGGCCAAAGGAGTTTTGACAAAGAAAAGCACAAAGCTAGCCTCAGGTGTTTCTAGTGAAGTTTCTTCATCACAAGAGGATGTTAGAGGAGCAAAGTTAGCTGGAGAATTATCTGCAACATGGATGGTAGAGTCAAATGACAGCATAAGAGGAGGTGTTACAGCGGACACCACACTTTCAATGCAAAACTCTGTAACATGTGATGAACTCCAGAGCTCTCGAAACAAAGGCATAGATGTGATTTGTGAGAAGCTAGGAGCCTCAGACTCCCTGACTATTTTGGACATTGACTCAGAGATAAAGGATCCTCAAGTTTGGAGTTCTTACGCTCCTGACATTTACAACACTATTCGAGTAACAGAGCTTCAAAGGAAACCATTGACCAACTACATGGATAAGTTGCAGAAAGATATTAATCCAAGCATGCGCGGAATTCTGGTCGATTGGCTTGTGGAGGTTTCTGAGGAATACAAGTTGGTCCCAGACACTCTTTATCTGACCGTGAACCTCATTGATCGGTATCTCTCAACAAGGTTCATTCAAAAGCAAAGGCTCCAGTTGCTCGGTGTTACTTGCATGTTGATTGCATCAAAATACGAAGAGATGTGTGCACCCCGAGTGGAAGAATTTTGCTTCATCACAGATAATACATACACAAAGGAAGAGGTATTGAAGATGGAGAGAGAAGTACTAAATCTTGTGCACTTTCAGCTATCTGTTCCCACAATCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCGTACAAGTCTCCTTGTGTTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTTGCTCTTGTTGAATACAGCTTCTTCCAGTTTCTACCTTCCCTTATAGCTGCATCTGCTGTGTTCCTTGCCAGATGGACCCTGAACGAGTCAGAACATCCATGGAATCCAACTTTGGAGTACTATACAAACTATATAGCTTCAGAGCTCAAAACTGTTGTTCTTGCGCTGCAAGATCTGCAACTTAATTCCAAAGGCTGTCCCCTGAATGCTGTCCGCGAGAAGTATAAACAACACAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAACCAGTGCAGTCACTCTTCCAGGACCAAGTGTAAATGTTTTTGGCTGTTCCCTAAAGACTAAAGGATGCCTTCAAAATTTCTGGCACAGTGATGGTTGAATTTATCATCAGTTATATATTTTACCATTCTTTTTATCATCAGAATCCCCCAATTAATGTCTGTTCAGTAACTGTAGCATTGTAAGGTGGTGTCAAATTCTGGCTTTTCCAGATCTCCTTGTAAACCAAATCGTTCCGGGATGATACAGTTCAAAGAGTGAGTTGATGTACTAACACCAAGTAGTAGGCTTCTTTTTAAGGTGGTTGTTGTTATGCAACATATCCGTGTAGCTCTTCTCAACATTTTGTACCGAAACATTTGTATGTAATAAAAATTACATTAC 1907 0.4116 MDKTNKVCAKDEERPLRITRARARALRGIPPYARPKNDPKNVLRANAKRTAISENKTSVVVPAVIQCKGRTVLTDVTNKCAPSQDKFTKASKFQAKGVLTKKSTKLASGVSSEVSSSQEDVRGAKLAGELSATWMVESNDSIRGGVTADTTLSMQNSVTCDELQSSRNKGIDVICEKLGASDSLTILDIDSEIKDPQVWSSYAPDIYNTIRVTELQRKPLTNYMDKLQKDINPSMRGILVDWLVEVSEEYKLVPDTLYLTVNLIDRYLSTRFIQKQRLQLLGVTCMLIASKYEEMCAPRVEEFCFITDNTYTKEEVLKMEREVLNLVHFQLSVPTIKTFLRRFIQAAQSSYKSPCVELEFLANYLAELALVEYSFFQFLPSLIAASAVFLARWTLNESEHPWNPTLEYYTNYIASELKTVVLALQDLQLNSKGCPLNAVREKYKQHKFNCVANLSPKPVQSLFQDQV 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01878 467 Gene3D - 219 332 - -
Pste2g01878 467 SUPERFAMILY Cyclin-like 194 331 IPR036915 -
Pste2g01878 467 SUPERFAMILY Cyclin-like 333 456 IPR036915 -
Pste2g01878 467 PIRSF Cyclin_A_B_D_E 18 466 IPR046965 GO:0016538|GO:0044772
Pste2g01878 467 CDD CYCLIN_AtCycA_like_rpt1 195 330 - -
Pste2g01878 467 SMART cyclin_7 241 325 IPR013763 -
Pste2g01878 467 SMART cyclin_7 338 426 IPR013763 -
Pste2g01878 467 Gene3D - 205 453 - -
Pste2g01878 467 CDD CYCLIN_AtCycA-like_rpt2 334 448 - -
Pste2g01878 467 FunFam Cyclin A1 321 453 - -
Pste2g01878 467 Pfam Cyclin, N-terminal domain 205 331 IPR006671 -
Pste2g01878 467 FunFam Mitotic cyclin 6 219 319 - -
Pste2g01878 467 PANTHER CYCLINS 161 449 IPR039361 -
Pste2g01878 467 ProSitePatterns Cyclins signature. 236 267 IPR006671 -
Pste2g01878 467 Pfam Cyclin, C-terminal domain 334 456 IPR004367 -
Pste2g01878 467 SMART Cyclin_C_2 334 457 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01878 Pste-Chr2 19171644 19177723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01878 9 463 Core Cell Cycle Gene Families AT5G25380 52.155 7.60e-147 425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01878 2 19171644 19177723 Pste2g01878 2 19171644 19177723 ECH
Pste8g00893 8 4589401 4595614 Pste2g01878 2 19171644 19177723 PCT