Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01872 ATGGGGAAAAAATCGAGTCCGACGGAGGGAGAGGAAGCGGTGCCGGAGCATCTGCGGTGCAGCCGTACCGACGGGCGGCAATGGCGGTGCCGGCGGCGAGTGATGAAAAACCTAAAGCTGTGCGAGATTCACTATGCGCAAGCTCAGCGTCGTCAGCAGAAGAAGAAGGTTCAGGAGTCGCTGAAGCTTAAGAGAAAGAGGCAAAACGACACCGTTGAGATTCAGATTGGGGCAAAGAGGAACCGGAAATCCTCTGAGGCGTTGGCCAATAGGAGGAAGCAATTGGAGCTTATTAGAATGGTTCTGCAGAGACAGATTGAGAAGAAGAACAAGGAATCGCAATTCAATTTGAATTTGCATTTGCATTTGCATTCCAATCACGAGTTAAAGAAGGAACTGCCCAATGGGGCTATGGCTATTGCTTCCGCTTCAAAGCCCCATGTGGCTTCTTCTCGTTGCTTCAGGTCCAAGAATGCTGAGAAGGCTTCTGTTAGTCAGTTGCAGTGTGGAAGAAACACGAAAAAGGGCAGGAGGAAGAAGTGTCATTGGTGTCAGAGAAGTGACTCTTGGAGTCTTATAAGGTATTTTGATACTCAAAATGAGGTTAAGATGGCATGTCCAGTTTGTCGAGGAACTTGCAACTGTAAAGATTGCTTGGCAAGTCAATATGAAGACAGTGAAAGTAAGGAATGTTTGGCTGGTGAAAACAGAGTTGATAGGATAGTGCATTTTCATTATTTGATCTGTATGCTCCTTCCTGTACTAAAACAAATAAAAGAAGACCACTGTGTGGAAGAAGAAACAAAAGCAAAAATTAAAGATGGGAAAAGAATTTCAGATATTCTCATCAAGCCAGTTGATTTTGTCTTTGATGAGAAAAGCTACTGCAATTACTGCAAAACACCCCTTTTGGATCCTCACAGAAGCTGCCTTAGTTGCACCTACAGTCTTTGTTTAGGTTGTTCTCAGACATTAAGTCAAGGAAGCAATTCTGAAGAAATCAATTCTTCTATATCCAAATCCAAGCTACCTGACAAAAATGCTTGCATTTCTAATGAAAGTCGCCTTCTAGACAATAAGGTCATTTGTAGTGGTAACTTAACTGATACCTCAACGTTACCTGAGTGGACAAATTGTTATGGTGTTAACATTGTGTCATGCTCACCACATACAAAACTTGGTGATTGTGGTGATAGCCACCTTGATTTGAAATATGTTTTTCCCTTAAACCGGATCAAAGAAATGGAAGTAAAGGCAGAAGAAATAGTTTGCAGCTATGACTTTCCTGAAACTTTGGATAAAAGTTCAAGTTGCTCACTGTGTGTTGACAAAGATCATAAAACTAGCAGATACAAGCAGTTACAAGAAGCAGCTCAAAGAGAAGATTCTAATGATAATTACTTATTTTGTCCTACAGTTTTGGACATCAGTTGCAATCATTTTGAACACTTTCAGAAACACTGGGGAAAAGGCCATCCTGTAGTAGTGCGAGATGTGCTCCTAAGTACACCAAACCTGAGTTGGAATCCACTGGTCATGTTCTGTACTTATGTTGAGAGGAGCATGACAAGATATGAGAATAATAAGGACTTACTTGAAGCTTGTTTGGATTGGTTTGAGGTGGAGATTAACGTTAGGCAGTATTTTACTGGATCTCTTAAATGCCAACCTCAGAAAAATACTTGCCATGAGATGCTGAAACTTAAAGGATGGTTGTCCTCTCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTAATTGATGCTCTTCCAATTCAAGAATACATGCATCCCTTGTCTGGTCTTCTGAATTTAGCTGCAAATTTGCCGCCTGGGAGTACAAAACATGACATAGGACCATATGTTTATATTTCATATGGCTGTGCCGATGAAGAAGCTGATTCTGTGACAAATCTCTGTTATGACTCATATGACGTGGTCAACATTATGGCACATACCATGGACATCCCTCTCTCTACAGATCAGCTTGCCAAAATAAATAAGCTACTGAAAAAACACAAAGCTTTATGCCAAAAGGTGTCATCTAAAACTACTAGTTCAGAAGACAGGAAACAAAATGAAATGCATAGTGTGGTAAGAGAAGGAACTGACTTTTTAAGGAGAGTTAATAGAACATCTTGCATCTCTACCGAAGCCAAAACGATATCTAATCAGAATTTAGACACCAATATTTCTGGTTATGAAGAATGTGATTCCGATTTTGAAACTGAAAAGGCACAAAGCTCTTTACCTTTCCACAGGACAGTTCTAAGCACTGAGAAGTCTCCAGATCATAATCCTAGAAATCCCCTTGAAAACTCACACAGTGATAAAAGGAAGAAGTTCACTGACAATTCTGGTGCTCATTGGGATGTCTTTCGAAGACAGGATGTGCCAAAGCTCTTAGAATACCTTAAAAGACACTCTGATGAATTTTCGTATACTAGTGAACATCATGAGAAGATGGTTCATCCAATTCTGGATCAGAGCTTCTTTCTTGACAATACTCACATGATGAGACTTAAGGAGGAGTTTAAAATTGAACCATGGACTTTTGAGCAACATGTTGGAGAAGCTGTTATCATTCCTTCTGGATGTCCATATCAGATTAGGAATCCTAAGTGTTGTGTACATGTGGAATTGGAATTTGTTTCGCCTGAGAATGTCTCTGAGTGTATCCAATTGATTGATGAGGTCCGGCTGCTTCCAGAAGATCATAAAGCAAAAGTAGAAAAGCTGGAGGTTAAAAGATTGGCCCTTTATAGCATGAGTACCGCAATAAAAGAAATACGTGAGCTTACATGCAAAACATGATTGATCAAGCTAAAATAAATTCTTCAGATGCCTCTGAACCTCTCGCTTCTCTGCCTCCATACCCTGCATTCTTTGTTGTATAGACTAATTCTAGATCTAACAAAGAGTACTTAAATTTGTTACTTCCAGTTTCTATTTTTTTAGTTTGTTGTTACATTTATGCCTACCTGAATCTTAAATAAAAATTACATGGTCTGTATATATTCCTTAATTGTGTATTTTTAGAGGGAAATTCAAATAGTGAGAGGAAAAATTAATTCAGTCTCAG 3088 0.3951 MGKKSSPTEGEEAVPEHLRCSRTDGRQWRCRRRVMKNLKLCEIHYAQAQRRQQKKKVQESLKLKRKRQNDTVEIQIGAKRNRKSSEALANRRKQLELIRMVLQRQIEKKNKESQFNLNLHLHLHSNHELKKELPNGAMAIASASKPHVASSRCFRSKNAEKASVSQLQCGRNTKKGRRKKCHWCQRSDSWSLIRYFDTQNEVKMACPVCRGTCNCKDCLASQYEDSESKECLAGENRVDRIVHFHYLICMLLPVLKQIKEDHCVEEETKAKIKDGKRISDILIKPVDFVFDEKSYCNYCKTPLLDPHRSCLSCTYSLCLGCSQTLSQGSNSEEINSSISKSKLPDKNACISNESRLLDNKVICSGNLTDTSTLPEWTNCYGVNIVSCSPHTKLGDCGDSHLDLKYVFPLNRIKEMEVKAEEIVCSYDFPETLDKSSSCSLCVDKDHKTSRYKQLQEAAQREDSNDNYLFCPTVLDISCNHFEHFQKHWGKGHPVVVRDVLLSTPNLSWNPLVMFCTYVERSMTRYENNKDLLEACLDWFEVEINVRQYFTGSLKCQPQKNTCHEMLKLKGWLSSQLFKEQFPAHFAEVIDALPIQEYMHPLSGLLNLAANLPPGSTKHDIGPYVYISYGCADEEADSVTNLCYDSYDVVNIMAHTMDIPLSTDQLAKINKLLKKHKALCQKVSSKTTSSEDRKQNEMHSVVREGTDFLRRVNRTSCISTEAKTISNQNLDTNISGYEECDSDFETEKAQSSLPFHRTVLSTEKSPDHNPRNPLENSHSDKRKKFTDNSGAHWDVFRRQDVPKLLEYLKRHSDEFSYTSEHHEKMVHPILDQSFFLDNTHMMRLKEEFKIEPWTFEQHVGEAVIIPSGCPYQIRNPKCCVHVELEFVSPENVSECIQLIDEVRLLPEDHKAKVEKLEVKRLALYSMSTAIKEIRELTCKT 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01872 939 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 16 937 IPR045109 GO:0032454|GO:0033169
Pste2g01872 939 SUPERFAMILY Clavaminate synthase-like 477 916 - -
Pste2g01872 939 Gene3D Cupin 470 911 - -
Pste2g01872 939 MobiDBLite consensus disorder prediction 686 703 - -
Pste2g01872 939 ProSiteProfiles JmjC domain profile. 600 902 IPR003347 -
Pste2g01872 939 MobiDBLite consensus disorder prediction 683 703 - -
Pste2g01872 939 ProSiteProfiles WRC domain profile. 14 59 IPR014977 -
Pste2g01872 939 Pfam JmjC domain, hydroxylase 788 885 IPR003347 -
Pste2g01872 939 Coils Coil 92 112 - -
Pste2g01872 939 SMART cupin_9 581 902 IPR003347 -
Pste2g01872 939 Pfam WRC 15 56 IPR014977 -
Pste2g01872 939 MobiDBLite consensus disorder prediction 760 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01872 Pste-Chr2 19112158 19117885 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste2g01872 JmjC 4.4e-10 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03629 3 28564482 28571300 Pste2g01872 2 19112158 19117885 PCT