Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01871 ATGAGCCCTCTCTCTGATAACTACAAAACACAGTCTCTCCCACTTGATCAAATTGTCCCCTTAGACTTTTCTTCTATCCCTGGCTTACCTGATTCCCACGCATGGTCTCCCAATGATGATGATGATGGTGGATCATCAACCATACCCCTCATAGACCTCATGGATCCCAATGCCATGGAACAAATAGGCCTTGCATGTGAGAAGTGGGGTGCCTTCCAATTGAAGAACCATGGCATACCCTTTAGTGACATTCTAGATGTTGAAGAAGAGAGTAAAAGGCTCTTCTCTCTTCCCACTGAACACAAGTTGAAGGCTCTTAGATCCGCCGATGGTGCCACTGGATATGGCCGAGCCAGGATTTCACCCTTCTTCTCCAAGTTCATGTGGCATGAAGGATATACCATCATTGGTTCTCCTTCTCATGATGCCAAAAAGATTTGGCCTAATGATTATGCACGCTTTTGTGAAGTGATGGAGAATTATGAGAAGCAAATGAAGAGTGTAGCAGAGAGATTAACAGAGATGACGATGAAATGGTTGGAGGTAAGTGAGGAAAAAAGAAAGTGGGTAGGAGGAAGCAACATAACGGGAGCGGTTCAGTTGAATTGCTACCCAAATTGTCCGGAGCCGGAGAGAGCAATGGGTTTAGCCCCTCACACCGACACCTCATTCTTCACAATCCTCCAAAGCCAAACCAGCGGTCTCCAAATAAAGACAGATCATGAAGAAAAAGGCTGGACTACGGTGCACCCTCTCCCAAACACCCTCATCATTTTCGCAGGAGATTTCTTACACATCCTCTCCAACTCAAGGTTCCGTGCTGCCCTTCACCGCGTAACGGTCAATAGGAACCAGAAACGTTACTCTGGGGCTTATTTCTACTCTCCACCCTTAGATTATCTTGTTTCTCCTGTGCTTCATAACTCTGTTCCTCGTTTCCGTGACGTCACTGTCAAGGAGTATGTTCAGATTAGGGCCAAAAACTTTGAAGATGCATTGTCTTTCATCACTCTTCCAAACTAGATACATATTCCACTTTCTACCTAATAAACTTGTTCCTATCTTTCCATTTCCGTTAATAAAATCTTCCATATCACTGTTACTCCCTT 1109 0.4463 MSPLSDNYKTQSLPLDQIVPLDFSSIPGLPDSHAWSPNDDDDGGSSTIPLIDLMDPNAMEQIGLACEKWGAFQLKNHGIPFSDILDVEEESKRLFSLPTEHKLKALRSADGATGYGRARISPFFSKFMWHEGYTIIGSPSHDAKKIWPNDYARFCEVMENYEKQMKSVAERLTEMTMKWLEVSEEKRKWVGGSNITGAVQLNCYPNCPEPERAMGLAPHTDTSFFTILQSQTSGLQIKTDHEEKGWTTVHPLPNTLIIFAGDFLHILSNSRFRAALHRVTVNRNQKRYSGAYFYSPPLDYLVSPVLHNSVPRFRDVTVKEYVQIRAKNFEDALSFITLPN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01871 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 48 324 - -
Pste2g01871 340 Pfam 2OG-Fe(II) oxygenase superfamily 199 296 IPR044861 -
Pste2g01871 340 Coils Coil 158 178 - -
Pste2g01871 340 FunFam Gibberellin 3-beta-dioxygenase 1 17 324 - -
Pste2g01871 340 Gene3D - 17 332 IPR027443 -
Pste2g01871 340 SUPERFAMILY Clavaminate synthase-like 18 329 - -
Pste2g01871 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 148 IPR026992 -
Pste2g01871 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 194 296 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01871 Pste-Chr2 19098389 19099980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01871 48 337 Glycosyltransferase AT5G59530 27.273 2.90e-29 114