Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01852 TTCAAAGTGTGTGTGACTGTTGCAAGTGATAAAACATATATAGCTTCAAGTCTGGTCATGGCTGAGGAGTTTCAAGCTGCTATATGTGGTGAAACTTGGTGGAATATTAATCCAACAAGAAGTGTGTTCCCTCTGATGTCATCAACTTGTTCTGTGGAAGCAGCTGATGTAGGAAACTACAGCACTTGGCAAACCGATTTCGTGGATTTGAAGGGAACAAGGTCTTTTGCTGAGGAGACTAATAATAACTTGGTTTCTTCTTATACTTGTCCGAGTTTTCTTGATGCCGAGAAGCCACAGCAGAGTGACTCAGCTAGTGGAACTTGTAGCATCTTGATCGATTCCACCTTACAAATGATGGGTTTTGGCTTGTCATCTTCAACTTCATCCAATTGGAATCAATCTCTATTAGGGAGAGGTTTTCATTCCGTGCTTCAAGAAGAAACAGGCATGGGTGGTGGCAGCTCTTCCAACAATTCACAAATTCAAAAGGATTGGAGTCCAAAAAATTTCTCATCTGCTGGTGGTAGCCAAGTTTCCTCAGTTGATTCTTTCAAGCCAATGAACCAAGAATTTTCCTTGGATCAGCAGAGTCTTAATTCTGTTGTAACAAGCACCGGATCATTATCTGGTGGCTTCCCAATTGTTTCATCCTCCTATGGTTACCCTTCAACGTTGATACAAAGCATATACGAGCCTGAGCCTCAACCACAACCACCGAACTCACTTTTCACCAACCCCTCCATGTCCTATTCATCATCTACCGCAAACTATGGGACATGTTCCAATGAACTGTCACCAACTTGGTCTAAAGTCTCTTCCCTTCTCAAACCCTCAGTGCCAAAGCAGCAGCTCAGTGGCTTGCACTTTTCCAACAATACTCCTTTCTGGAATGCTTCCGCCGAAGCACTTCATGACATACGAGCAGGTGTTTTTGCTTCATCTCAAACACAATATCAAACGCCAAATTTTGAAGAGAAACCCAGCTGCCCCAAAACTCTACTAAACAAGCTCAAGAGAGAAGAATCACCAGATGCAGCGAAGAAAAATTCTTCTGAGCCAGCATTCAAGAGGCAAAGAATTGAGACTCCATCTCCATTACCAACTTTTAAGGTTAGGAAAGAAAAGCTGGGGGACCGCATCACCGCTCTTCAGCAATTGGTTTCACCTTTTGGAAAGACAGACACAGCATCCGTTCTTCACGAAGCCATCGAGTACATCAAGTTCCTTCATGTCCAAGTCAGTGTTTTGAGCACTCCATATATGAGAAATGGAACTCCCATTCAGGATTGTGATGATGTGAAGGAGTCAGAAGGGGAAAAAGAAGATTTGAGAAGCCGAGGGCTATGTTTGGTACCGATTTCAAGCACATTCCCGATGGCTAATGAGAGCAGCGTGGATTTCTGGACACCTACATTCGGAGGCGCACTTATTGGCAGGTAGAGACCTGTGGAGAACTGCTGACCATATGAAAACCACATATATTTATATGTATAAAGTAAAAGAAAGAAGAAGAAGAAGACACGGTTGTTAAAGAGAAAATTAAAGTTGAAGAGAACAAAAGAGAAAAAGAAGTGAGTCTTAAAAGAGGAAACGTAAAGCAGAATGGTGTACGTACGCTAGTAAATGATTAGTGGAATACTTGAAGAGAATAATAGATTAGCTTCAAGGCCCTTTAATTTTAATACTGTAGTTCCAAGTTACCAATGTGGATGAGTGGCAGGAACAAGTGCTAAATTCAAAGGCATTTGACACATAGATTATAGAGTTTTTGTTGCTGCTTTTGTTGTTAAAGTCAGTATTATATGCCTGAATTTAGCAGATGGGGCTGGCTAGCTGAATCGCCTTTTGTTCCTGCTGATCGATATGATTTACTATTATAATATATATTTTT 1894 0.4134 FKVCVTVASDKTYIASSLVMAEEFQAAICGETWWNINPTRSVFPLMSSTCSVEAADVGNYSTWQTDFVDLKGTRSFAEETNNNLVSSYTCPSFLDAEKPQQSDSASGTCSILIDSTLQMMGFGLSSSTSSNWNQSLLGRGFHSVLQEETGMGGGSSSNNSQIQKDWSPKNFSSAGGSQVSSVDSFKPMNQEFSLDQQSLNSVVTSTGSLSGGFPIVSSSYGYPSTLIQSIYEPEPQPQPPNSLFTNPSMSYSSSTANYGTCSNELSPTWSKVSSLLKPSVPKQQLSGLHFSNNTPFWNASAEALHDIRAGVFASSQTQYQTPNFEEKPSCPKTLLNKLKREESPDAAKKNSSEPAFKRQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKFLHVQVSVLSTPYMRNGTPIQDCDDVKESEGEKEDLRSRGLCLVPISSTFPMANESSVDFWTPTFGGALIGR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01852 480 MobiDBLite consensus disorder prediction 149 182 - -
Pste2g01852 480 MobiDBLite consensus disorder prediction 338 356 - -
Pste2g01852 480 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 361 410 IPR011598 GO:0046983
Pste2g01852 480 FunFam Transcription factor bHLH123 family 371 433 - -
Pste2g01852 480 MobiDBLite consensus disorder prediction 147 182 - -
Pste2g01852 480 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 140 458 - -
Pste2g01852 480 CDD bHLH_AtbHLH_like 367 418 IPR045239 -
Pste2g01852 480 MobiDBLite consensus disorder prediction 338 364 - -
Pste2g01852 480 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 371 425 IPR036638 GO:0046983
Pste2g01852 480 Gene3D - 371 426 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01852 Pste-Chr2 18871798 18874527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01852 20 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 36.383 2.59e-57 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03600 3 28272656 28277153 Pste2g01852 2 18871798 18874527 PCT