Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01840 ATGGAAAGTGGTGAACTGAGAGTTGCAAGTGCACGCATAGGGAGCTCCAGCATGTGGAGAAGCAGTGGCATCGATGTGTTTTCAGGGTCTTCAAGAAGGGAAGATGATGAACAAGAGCTTAAATGGGCTGCAATTCAGAAACTTCCCACGTATCTACGCATGACTAGGGGCATTCTCACCGAAGCAGAAGGCAAACCTACAGAGATTCATATCAACAAACTTGGCCCACTTCAGAGGAAGAACTTGGTGGAGAGGTTGGTCAAGATTGCAGAAGAAGATAATGAGAAGTTCTTGTGCAAGTTAAGAGATCGCATTGATCGTGTTGGACTTGAAATTCCCACGATTGAAGTCCGTTTTGAGCACTTGAATATTGAGGCAGAAGCTCATGTGGGAAGCAGGGCGCTACCTACAATCTTTAACTTCTGCATTAATTTATTGGAGGGGTTCCTCAATTCTCTTCACCTTATTCCCAGTCGAAAGAAGCCATTCACAGTTCTTCATGATGTCAGTGGAATCATCAAGCCTAAAAGAACGACACTGCTTTTAGGCCCTCCAAGCTCTGGAAAGACCACATTATTGTTGGCACTGGCTGGAAGACTTGGTAAAGATCTAAAATATTCTGGTCGAGTTTCGTATAATGGCCATGGGATGGAGGAATTTGTGCCTCAGAGAACATCAGCCTACACCAGTCAAAATGATCTACACATAGGAGAAATGACAGTCAGAGAAACATTGGCCTTTTCGGCAAGGTGTCAAGGGATCGGAACCCGTTATGAGATGTTGGCAGAGTTGTCAAGAAGAGAGAAAGCTGCAAACATTAAGCCAGATCCTGATATTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAACCAATGTAGTTACAGATTATATAATGAAGATTTTGGGACTAGAAGTTTGTGCTGATACCATGGTAGGGGATGACATGATTCGAGGTATTTCTGGCGGACAAAAAAAGAGAGTCACAACCGGTGAGATGCTAGTTGGACCAGCAAGAGCACTTTTCATGGATGAAATATCAACTGGTTTAGACAGTTCTACCACATACCAAATGGTTAATTATCTAAGACAATCTATCCACATTCTGAATGGAACAGCAGTGATCTCTCTTCTCCAGCCAGCACCAGAAACTTATGAGTTATTTGATGATATAATTCTCCTCTCAGATGGGCAAATTGTGTATCAAGGTCCAAGGGAAAATGTTCTTGAATTCTTTGAATTCATGGGATTCAAATGTCCGGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTAACATCAAGAAAAGATCAAGAACAGTATTGGGCAAATAAAGATGAGCCATACACCTTCATCACTGTTAAAGAGTTTGCTGAAGCATTTCAGTCATTTCACATTGGACGAAAACTTGGTGATGAACTTGCCACTCCATTTGACACTTTCAAAGGCCACCATGCTGTGTTAACAAAGAATAAGTATGGTGTTAGCAAGAAGGAACTTTTGAAAGCCTGTGTGTCCAGAGAATTCTTACTTATGAAAAGGAATTCGTTTGTATATATTTTCAAGATGTGGCAATTGATTTTAACGGGATTCATAACAATGACATTGTTCCTGAGAACTGAGATGCACCGGGATACAGAAACTGACGGTGGAATCTATATGGGTGCGCTGTTCTTCATACTAATTGTGATTATGTTCAATGGATACTCGGAACTATCCATGTCCATTATGAAACTCCCAGTTTTCTATAAGCAAAGGGACCTTCTGTTTTTTCCTGCTTGGGCATATTCTCTGCCGACATGGATCCTTAAGATTCCTATCACCCTGGTGGAAGTGGGTATTTGGGTTGTGATGACTTACTATGTTATAGGATTTGATCCTAGTATTGAAAGATTCATCAAGCAGTTCTTTCTGCTTGCTTGTATCAACCAAATGGCATCTGGACTTTTTCGATTTATGGGGGCAGTTGGGAGGAACATCATTGTTGCAAACACAGTTGGATCATTTGCTTTACTTGCAGTTATGGTCATGGGTGGATTCATCTTATCCAGAGCAGTTGATGTGAAGAAGTGGTGGTTGTGGGGTTACTGGTCCTCGCCAATGATGTATGGACAGAATGCTATAGCTGTGAATGAATTCCTCGGAAAGAGTTGGTCACATGTTCCGCCTAACTCAACAGAATCATTAGGAGTAAAGGTCTTGAAGTCACGTGGGATCTTCCCTGAAGCATACTGGTATTGGATTGGTGTTGGAGCTTCCATTGGATACATGTTACTATTCAACTTTCTTTTCACCTTAGCCTTACATTATCTTGACCCATTTGGTAAGCCCCAAGCGTTAATATCAGAAGAAGCCTTAGCTGAGAGAAATGCTGGTAGAAACGAACACATCATTGAACTGTCCTCTTCTGATAAAGGGAATGGAAGTAGTAGAAGTGTGTCCTCCAGAACACTGTCAGGTAGAGTGGGAAGCATTGGTGCAAGTGATCACAATAGGAAGCGAGGAATGATTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGATATGAAGTGGAGATGCCACAGGAAATGAGGAACCAAGGCGTTCTTGAAGATCGACTTGAACTTTTAAAGGGTGTTAGTGGAGCTTTTAGACCAGGAGTTCTGACAGCTCTAATGGGTGTAAGTGGAGCTGGTAAAACAACTCTTATGGATGTATTATCTGGAAGGAAAACAGCAGGTTATGTTCAAGGGCAAATCACTATATCGGGGTACCCTAAAAAGCAAGAAACGTTTGCTCGCATAGCAGGATACTGCGAGCAGACTGATATCCACTCTCCTCATGTTACAGTCTATGAGTCTTTGGTTTATTCTGCATGGCTTCGGTTACCCCCTGAGGTTGATTCTGCCACCAGACAGATGTTCATTGAGGAAGCTATGGAGCTAGTGGAGTTGACTCCATTAAGAAAAGCCTTGGTGGGATTGCCTGGAGTGAATGGCCTGTCCACGGAGCAGCGCAAGAGGTTAACAATTACAGTTGAACTTGTCGCCAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCCAGAGCTGCAGCTATAGTAATGAGAACAGTAAGAAATACAGTCGATACTGGGAGAACGGTGGTCTGCACAATCCACCAGCCTAGCATTGATATATTTGATGCTTTTGATGAGCTACTTCTCTTGAAGCGTGGAGGTGAGGAAATATATGTGGGACCTTTAGGCCAGCAATGTTCTGATTTGATCAACCACTTTGAGGGAATTAATGGGGTGCCAAAAATTAAGAATGGTTATAATCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAATTTTGCCGAAATATACAAGGATTCCGACCTATATAGGAGGAATAAGGCCTTGATCAGAGAACTTAGCACACCTCCAGCAGGTTCCAAAGACCTGTACTTCCCCACAAAGTACTCACAGACTTTCTTCACCCAATGCATAGCTTGCCTTTGGAAACAGCACTTGTCATACTGGCGAAATCCTCCATATAGTGCAGTGAGATTTTTATTCACAACAATCATAGCATTATTGTTTGGGACAATATTTTGGGATATCGGCTCCAAAAGGCAAAGAAAACAAGATCTATTTAATGCAATGGGATCCATGTATGCTGCAGTCCTCTTCATTGGGGTACAAAATTCTACATCTGTGCAACCAGTTGTGGCCATTGAGAGAACAGTCTTCTACAGGGAAAGAGCTGCCGGAATGTACTCAGCTTTACCATATGCATTTGGACAGGTTGCTATTGAGATCCCATACATATTCATACAGACCCTGGTGTATGGGGTCATAGTATATGCTATGATTGGGTTTGAATGGACGTTGAGCAAGTTCTTTTGGTATCTCTTCTTCATGTTCTTCACATTTCTATACTTCACCCTTTATGGCATGATGGCTGTGGCTCTCACCCCGGATCACAATGTTGCTGGTATAGTTTCTTTTGGGTTCTACATGATATGGAACCTTTTCTCAGGATTTGTGATTCCAAGAACGAGGATGCCAGTGTGGTGGAGATGGTACTTTTGGATATGTCCTGTGTCTTGGACCTTGTATGGATTGGTGACATCACAATTTGGTGACATAAAAGAACGTATAGAGACTGGAGAGACAGTGGAAGAGTTTGTTAGGATTTATTTTGGATATAGACATGACTTTATAGGCATAGCTGCAGCTGCGCTTGTCGGGTTTTCACTACTTTTTGGATTTGTCTTTGCCTTCTCAATTAAGGCATTCAATTTCCAAAAGAGATAA 4335 0.421 MESGELRVASARIGSSSMWRSSGIDVFSGSSRREDDEQELKWAAIQKLPTYLRMTRGILTEAEGKPTEIHINKLGPLQRKNLVERLVKIAEEDNEKFLCKLRDRIDRVGLEIPTIEVRFEHLNIEAEAHVGSRALPTIFNFCINLLEGFLNSLHLIPSRKKPFTVLHDVSGIIKPKRTTLLLGPPSSGKTTLLLALAGRLGKDLKYSGRVSYNGHGMEEFVPQRTSAYTSQNDLHIGEMTVRETLAFSARCQGIGTRYEMLAELSRREKAANIKPDPDIDIYMKAAALEGQETNVVTDYIMKILGLEVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTYQMVNYLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEFMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYTFITVKEFAEAFQSFHIGRKLGDELATPFDTFKGHHAVLTKNKYGVSKKELLKACVSREFLLMKRNSFVYIFKMWQLILTGFITMTLFLRTEMHRDTETDGGIYMGALFFILIVIMFNGYSELSMSIMKLPVFYKQRDLLFFPAWAYSLPTWILKIPITLVEVGIWVVMTYYVIGFDPSIERFIKQFFLLACINQMASGLFRFMGAVGRNIIVANTVGSFALLAVMVMGGFILSRAVDVKKWWLWGYWSSPMMYGQNAIAVNEFLGKSWSHVPPNSTESLGVKVLKSRGIFPEAYWYWIGVGASIGYMLLFNFLFTLALHYLDPFGKPQALISEEALAERNAGRNEHIIELSSSDKGNGSSRSVSSRTLSGRVGSIGASDHNRKRGMILPFTPLSITFDEIRYEVEMPQEMRNQGVLEDRLELLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTAGYVQGQITISGYPKKQETFARIAGYCEQTDIHSPHVTVYESLVYSAWLRLPPEVDSATRQMFIEEAMELVELTPLRKALVGLPGVNGLSTEQRKRLTITVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGQQCSDLINHFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVNFAEIYKDSDLYRRNKALIRELSTPPAGSKDLYFPTKYSQTFFTQCIACLWKQHLSYWRNPPYSAVRFLFTTIIALLFGTIFWDIGSKRQRKQDLFNAMGSMYAAVLFIGVQNSTSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEIPYIFIQTLVYGVIVYAMIGFEWTLSKFFWYLFFMFFTFLYFTLYGMMAVALTPDHNVAGIVSFGFYMIWNLFSGFVIPRTRMPVWWRWYFWICPVSWTLYGLVTSQFGDIKERIETGETVEEFVRIYFGYRHDFIGIAAAALVGFSLLFGFVFAFSIKAFNFQKR 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01840 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 847 1100 IPR003439 GO:0005524
Pste2g01840 1444 CDD ABCG_PDR_domain2 844 1082 IPR034003 -
Pste2g01840 1444 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 7 1444 - -
Pste2g01840 1444 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Pste2g01840 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 423 IPR027417 -
Pste2g01840 1444 Pfam ABC transporter 875 1027 IPR003439 GO:0005524
Pste2g01840 1444 Pfam ABC-2 type transporter 1172 1386 IPR013525 GO:0016020|GO:0140359
Pste2g01840 1444 Pfam ABC-2 type transporter 502 715 IPR013525 GO:0016020|GO:0140359
Pste2g01840 1444 Pfam ABC-2 type transporter 381 434 IPR043926 GO:0140359
Pste2g01840 1444 MobiDBLite consensus disorder prediction 801 826 - -
Pste2g01840 1444 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Pste2g01840 1444 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 1086 IPR027417 -
Pste2g01840 1444 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Pste2g01840 1444 FunFam ABC transporter G family member 34 153 457 - -
Pste2g01840 1444 Gene3D - 861 1090 IPR027417 -
Pste2g01840 1444 Pfam Plant PDR ABC transporter associated 720 783 IPR013581 -
Pste2g01840 1444 FunFam ABC transporter G family member 40 861 1091 - -
Pste2g01840 1444 SMART AAA_5 884 1076 IPR003593 GO:0016887
Pste2g01840 1444 SMART AAA_5 175 407 IPR003593 GO:0016887
Pste2g01840 1444 MobiDBLite consensus disorder prediction 803 826 - -
Pste2g01840 1444 Gene3D - 152 462 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01840 Pste-Chr2 18792886 18800065 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01840 850 1059 Calmodulin-binding Proteins AT2G36910 26.267 1.11e-06 51.6