Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01838 ATGCTTGAGGCTTGGCTCTCTCTCAAGAAGACTCTTCAGTGCAAACCACACCCAGATCAAGTTCATGATCCAAAGACTATTAGGCAGGGAAAAGGTAATCAGAGAGCAAAGTTAGCTAATCTTGAGGGTTCAAATATCAAAGATTTCATCCAAGGAAGCAAGAGACATTTGAAAAATCCACTAAGTTTTAGAGGGGACATTCACATCACTAGTCCCATAAACCATGAAATTGTTCTTGATAGCTCAAACAATGAAACTTGTCGATGTTGTTCTTGTCCTCGAAGCAATAGTGGCAATAAAGCTTCTGAAGGTTCTCATAGAACACGAAGGTCAGCCACATCTTCAACAATAACATATCCTGTTGATCACAATGAAGCAAATATATCCTCCAACACAAGGACCTTGGTTCAGATGAATGATTCTGATGGTTGTTCAACGTTGACATGTCATAAATGTGGCGAGAAATTAAAAAATCTTGATGCTGTAGAAGCTCACCGTATCTCCGAGCATTCAGTTACTGAAGTTGAAGAAGATACATCTAGACAGATTATAGAAACAATATGTGGAAGTGGAACCAGCTCAATTATTTCTGAAAACATGTTGGGGCAGATTGACAGCATTTTAAAGGTTCTGAACGTACCAAAAACATTTGCTAGCTTTGAGGAATACAGAGAAAAGGTGAAGAATAAGGCTGACAAGATACACAAGAAGCATCCGCGTTGTGTGGCTGATGGAAACGAGCTTTTAAGGTTCCATGGCACGACCATTGCATGCTCTCTAGGCACAAACAGTTCTTATAGCCTGTGCACTTTAGACTATTGTGGCATATGTCAAATTCTAAGACATGGCTTCTCCACCAACAAGGAATTCCATGGTGCATTGGGGGTTTACACCACTTCCACAAGTGGGAAAGCCTTTGATTCCATTTCCATTATGACATCCCATGAGAGACCATTTCCTAGAAAGTCTGTCATAGTGTGCAGAGTAATAGCTGGGAGAATTTACAGTCCTCTTGAAGAAAAGGTTGATTCAGAGTTTGATTCATTGGCAGAAAAAATAAATGTTCATTCAGATGTTGAGGAACTATACGTGTTAAATCCCAAGGCTCTGCTCCCTTGCTTTGTGGTTATCTACAAACAGCAAACAGCTAAGGTTAGAAGGTTCAGCTCAAGCTTGAGGATAAGTAGCTTTTAACACCAAGGTTCTCTCGCATGTCAGAGTAGTGATTCTTATATATTTTAGAGCTTCCAATTTATTTATTTGCTCGGGATTGATGTACAGATAAAACATTAATTCAAAATCTGTACAACATTCTATCCAGTTGGACTTGCTGTATTTTTAGCTGTTGCAGGCAAGGAGCAATAATATATTCATTCATAC 1380 0.392 MLEAWLSLKKTLQCKPHPDQVHDPKTIRQGKGNQRAKLANLEGSNIKDFIQGSKRHLKNPLSFRGDIHITSPINHEIVLDSSNNETCRCCSCPRSNSGNKASEGSHRTRRSATSSTITYPVDHNEANISSNTRTLVQMNDSDGCSTLTCHKCGEKLKNLDAVEAHRISEHSVTEVEEDTSRQIIETICGSGTSSIISENMLGQIDSILKVLNVPKTFASFEEYREKVKNKADKIHKKHPRCVADGNELLRFHGTTIACSLGTNSSYSLCTLDYCGICQILRHGFSTNKEFHGALGVYTTSTSGKAFDSISIMTSHERPFPRKSVIVCRVIAGRIYSPLEEKVDSEFDSLAEKINVHSDVEELYVLNPKALLPCFVVIYKQQTAKVRRFSSSLRISSF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01838 397 SUPERFAMILY ADP-ribosylation 176 381 - -
Pste2g01838 397 MobiDBLite consensus disorder prediction 94 115 - -
Pste2g01838 397 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 378 - -
Pste2g01838 397 ProSitePatterns Zinc finger C2H2 type domain signature. 149 170 IPR013087 -
Pste2g01838 397 Gene3D - 151 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01838 Pste-Chr2 18769531 18771362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01838 4 379 C2H2 Transcription Factor Family AT5G54630 41.794 1.25e-97 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste2g01838 None None None