Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01824 ATGTCCACGCGTGCGTTCTTCGCTAGATTGTGTTTCACCCATGACCAGGCACACGACGATGAGAACCGCAGAGATCCCATTGAGTTTGATCGTATGTCCAACGATGGAAGTCAATACAGCCTCAACGGTATTCCGCTTCCGTCACTCGGCGCCACTGCCGCGCCCAGCTCCCGGAGACTCAAGCTCCGGGGTTTCATCATCTCGCCGTACAATCCTCGTTACAGATTATGGGAGACGTTTCTGGTGTTCTTAGTTTTCTATACTGCATGGGTTTGCCCTTTTGAGCTAGGATTCCTTACTTATCCAACGGATGCTCTGTCCATCACTGACAATGTGGTGAACTCTTTTTTTACCATTGACATTGTTCTCACTTTCTTTGTTGCCTACCTAGACAAGGCTTCATATCTGCTAGTGGACGAACCAAAACTCATTGCCTTGAGATATGCCAGAACATGGCTCGCGTTTGATGTCATCTCCACCATCCCTACTGAACTAGCCCAAGCTGTGTTGCCTACTCCTCTTAAAACATATGGTTACTTCAATTTGCTCCGTCTTTGGCGTCTCCGTAGAGTTAGTGCCATATTTAAAAGATTAGAAAAGGACAGAGCTTATAACTACTTCTGGGTACGCTGTTCAAAGCTTATTTGTGTTACTCTATTTTCAGTGCATTTTGCTGCCTGCTTTTTCTATTTTCTTGCTTCAAATCGAGTACAAAAATCAACATGGCTTAGCCTGGTTGGTGATGATTCTCTAAACAGTGTTGGTAAGCGCTACGTAACATCGATGTATTGGTCCATAGTGACTCTTTCAACAGTCGGCTATGGCGACCTGCATCCTGTAAATACCAGGGAGATGGTGTTTGACATATTTTATATGCTCTTTAACCTGGGCCTGACGGCATATCTCATTGGCAACATGACAAACTTGGTTGTTCACGGGACAAGCAGAACTAGGAAATATAGAGACACAGTGCAAGCTGCCGCAGGTTTTGCCCATCGGAATAAGTTACCTATCCGCTTGGAAGAACAGATGCTTGCTCATTTGTTTATGAAGTACAGAACTGATTTAGAAGGATTGCAGCAACAAGAAATTATTGAATCCCTTCCAAAGGCTATTCGATCTAGCATCTCAAACTACCTATTCTATTCACTTGTGGACAAAGTGTACTTGTTTCATGGTGTGTCAAGTGACCTAATCTTTCAACTGGTCACAGAGATGAGGGCTGAGTATTTTCCTCCAAAGGAAGATGTGATTTTGCAGAATGAAACGCCAACAGACTTTTATATCTTTGTTACTGGTGCTGCAGAACTAATCGTTAAGAAGAATGGAATTGAACAGGCAAGTCTGGTCGTTGGCGAGGTAGCGTCAGGAGATGTAGTTGGAGAAATAGGAGTTCTATGTTACAGGCCACAGTTGTTTTCAGTTCGAACCAAACGATTGAGCCAAATTCTGCGCTTGAACCGTACTACGTTTCTAAATCTTGTTCATTCAAATATTGGAGATGGGACAATAGTCATGAACAATTTTCTCCAGCATTTGCAAGAATCAAGGTATCCAGGGATGGATGTTGTTTTGGCAGAAACGGAAGCTATGCTTGCTCGGGGTAGAATGGACATGCCCATTACCACATGCTTTGCAGCAAACAGAAATGATGATCTATTATTACATCGTTTGCTTAAAAATGGTTCAGATCCAAATGAATTAGATAAGAATCGAAAGACAGCTCTGCATATTGCTGCTTCCAAAGGCAATGAGCATTGTGTAACTTTACTTCTAGAATATGGTGCTGATCCAAATAGCAAAGATATGGAGGGAAGTGTCCCACTATGGGAAGCAATGAAGGGTAGGCATGATTCTGTGATTAAACTTCTCATAGACAACGGTGCAGACATATCTTTTGCGGATGCAGGCCATCTAGCATGCACTGCTGTTGAGCAAAATAACATGGAATTGCTCAAGGAAATAATTCAATGTGGTGTGGATGTGACACAACCCAAAACGAATGGAACCACTGCTCTTCATACTGCAATAATTGAAGGAAACACTGAGATGGTTAACTTCCTTGTAGAACAAGGAGCAGACATTGATTTGCAAGATGCTAATGGGTGGGCTCCCAGGGCTTTGGCTGAACATCATGATCAGGTAGAAATTAGAAATATATTCCAGAACATTAGAGAGAGCAGAAAACCAGGTTTTATTCCAATGACAAACAAATACAGTAGTGGGAGGTTTCAAAGTGATCCCCGCGTGTCTACTATTTCCCAAGAAACCATGACACCTACTCAAGAGTTGACTGAGCTAGATAATGATGGGAGAAGATCTTCCAGCTCTTTTCACAATTCCATTTTTGGAGTGATCTCAACTGCCAAACGTGATAAGAGAAATCCCTGGGCACCTGAAAGCAGTAACAAAAATAGAGGGAATTTGAGAGTGACACTAAGTTGTCCTGAAAAAGGTCACCATGCTGGAAAGCTAGTTATGCTGCCCAATTCCCTTGAAGGGCTGCTAGATATTGGTGCCACAAAGTTTGATATATCTCCCACCAAAATTTTGACCATAGACGGAGCTGAAGTAGACGATATAAATCTTGTAAGAGATGGTGATCATCTCATTATTGCTCGGGATTGAAGAGGGAAACAAGAATTGGTTCCTAAACCTTTTTTTCTCATGGGTATCCTTGTTGTAGATTTGTATGTTGCCACCTTTTTCTGGTTCTTAATTTTTTCTTAGGAGCACATTTCTAACTTTTAGACAAAATCTTTCCCTCCCTCTTCAGCTG 2779 0.4225 MSTRAFFARLCFTHDQAHDDENRRDPIEFDRMSNDGSQYSLNGIPLPSLGATAAPSSRRLKLRGFIISPYNPRYRLWETFLVFLVFYTAWVCPFELGFLTYPTDALSITDNVVNSFFTIDIVLTFFVAYLDKASYLLVDEPKLIALRYARTWLAFDVISTIPTELAQAVLPTPLKTYGYFNLLRLWRLRRVSAIFKRLEKDRAYNYFWVRCSKLICVTLFSVHFAACFFYFLASNRVQKSTWLSLVGDDSLNSVGKRYVTSMYWSIVTLSTVGYGDLHPVNTREMVFDIFYMLFNLGLTAYLIGNMTNLVVHGTSRTRKYRDTVQAAAGFAHRNKLPIRLEEQMLAHLFMKYRTDLEGLQQQEIIESLPKAIRSSISNYLFYSLVDKVYLFHGVSSDLIFQLVTEMRAEYFPPKEDVILQNETPTDFYIFVTGAAELIVKKNGIEQASLVVGEVASGDVVGEIGVLCYRPQLFSVRTKRLSQILRLNRTTFLNLVHSNIGDGTIVMNNFLQHLQESRYPGMDVVLAETEAMLARGRMDMPITTCFAANRNDDLLLHRLLKNGSDPNELDKNRKTALHIAASKGNEHCVTLLLEYGADPNSKDMEGSVPLWEAMKGRHDSVIKLLIDNGADISFADAGHLACTAVEQNNMELLKEIIQCGVDVTQPKTNGTTALHTAIIEGNTEMVNFLVEQGADIDLQDANGWAPRALAEHHDQVEIRNIFQNIRESRKPGFIPMTNKYSSGRFQSDPRVSTISQETMTPTQELTELDNDGRRSSSSFHNSIFGVISTAKRDKRNPWAPESSNKNRGNLRVTLSCPEKGHHAGKLVMLPNSLEGLLDIGATKFDISPTKILTIDGAEVDDINLVRDGDHLIIARD 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01824 875 Pfam Ion transport protein 75 317 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste2g01824 875 SUPERFAMILY cAMP-binding domain-like 315 513 IPR018490 -
Pste2g01824 875 Gene3D - 540 723 IPR036770 -
Pste2g01824 875 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Pste2g01824 875 ProSiteProfiles cAMP/cGMP binding motif profile. 390 512 IPR000595 -
Pste2g01824 875 SMART ANK_2a 571 600 IPR002110 GO:0005515
Pste2g01824 875 SMART ANK_2a 635 664 IPR002110 GO:0005515
Pste2g01824 875 SMART ANK_2a 668 697 IPR002110 GO:0005515
Pste2g01824 875 SMART ANK_2a 604 633 IPR002110 GO:0005515
Pste2g01824 875 SMART ANK_2a 536 567 IPR002110 GO:0005515
Pste2g01824 875 ProSiteProfiles Ankyrin repeat region circular profile. 604 635 - -
Pste2g01824 875 SMART cnmp_10 390 510 IPR000595 -
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 121 130 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 87 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 258 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 284 295 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 110 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 PRINTS EAG/ELK/ERG potassium channel family signature 302 311 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pste2g01824 875 FunFam Potassium channel KAT3 76 312 - -
Pste2g01824 875 ProSiteProfiles KHA domain profile. 810 875 IPR021789 -
Pste2g01824 875 Gene3D Jelly Rolls 358 520 IPR014710 -
Pste2g01824 875 Pfam KHA, dimerisation domain of potassium ion channel 810 872 IPR021789 -
Pste2g01824 875 SUPERFAMILY Voltage-gated potassium channels 69 311 - -
Pste2g01824 875 FunFam Potassium channel KAT2 378 517 - -
Pste2g01824 875 ProSiteProfiles Ankyrin repeat region circular profile. 571 602 - -
Pste2g01824 875 ProSiteProfiles Ankyrin repeat profile. 571 603 IPR002110 GO:0005515
Pste2g01824 875 MobiDBLite consensus disorder prediction 738 754 - -
Pste2g01824 875 CDD CAP_ED 390 498 IPR000595 -
Pste2g01824 875 Pfam Ankyrin repeats (3 copies) 643 710 IPR002110 GO:0005515
Pste2g01824 875 Pfam Ankyrin repeats (3 copies) 545 632 IPR002110 GO:0005515
Pste2g01824 875 PANTHER POTASSIUM CHANNEL AKT1 37 872 IPR045319 GO:0005249|GO:0006813
Pste2g01824 875 MobiDBLite consensus disorder prediction 732 754 - -
Pste2g01824 875 Gene3D - 75 311 - -
Pste2g01824 875 Pfam Cyclic nucleotide-binding domain 410 498 IPR000595 -
Pste2g01824 875 ProSiteProfiles Ankyrin repeat profile. 604 636 IPR002110 GO:0005515
Pste2g01824 875 SUPERFAMILY Ankyrin repeat 544 723 IPR036770 -
Pste2g01824 875 ProSiteProfiles Ankyrin repeat region circular profile. 668 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01824 Pste-Chr2 18595840 18603660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01824 30 875 Ion Channels AT2G25600 58.796 0.0 1014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01824 2 18595840 18603660 Pste2g01824 2 18595840 18603660 ECH
Pste8g00999 8 5242627 5252477 Pste2g01824 2 18595840 18603660 PCT