Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01811 TGTCAGACTAAACTCAAATCTTCCACGGGTCACAGTTCCATGTTCCATGTCCCATGCCCGATGATAGGCTAAGGTAAGCACCGACTGTGTTGATTGTTGAAAGTTGAAACCTTCTTTGTCCTTGTTCGCTCATCTTTCCATGCACGTGGATCATTCTTCTCCCTCTGAAACCAAACCCAAAATTCCAACTGACAACCCATTCCCTTCTGGTCACCTCACTCTTACACTTATTCCCCTCCTCGCCGCCCGCATGTTCGCCGGAGGAATTTTCCGGTTCGGTTCGCCGCCCATTATTCCTTCTACTCTCTTATTCCTCTGCCTCGTTGCTTCCTCTCTCTCTCTCTCTGATGAACTTCAACCACTCTTCAAGTTCAAGTCCTCTGTCCACAGTTCCAATGCTAATGTTTTCCATTCATGGACACAAGCTAATTCTCCATGCCAATTCACCGGGATTATATGTAATTCCAAAGGTTTTGTTTCCGAAATCAACCTTTCACAGAAACAACTAGAGGGCACTATTCCTTTTGACTCACTTTGCGACCTTCCATCGCTTGAGAAGATATCTTTCGGAACCAACTTATTGAATGGCACCATCAGTGAAGGGTTGAGGAAGTGCACCAACTTGAAATACTTGGATTTGGGTAACAATTCATTCACCGGTGCAGTGCCTGATTTGTCAACTTTGCACAAGTTAGAGTACTTGAGTTTAAACGCCAGTGGAATTTCTGGGGTGTTTCCATGGAAATCATTCGAAAATTTAACTCGTCTTCAGTTCCTTAGTCTAGGGGATAACCTATTGGACAAAACTCCTTTCCCTTTGGAGGTTTTAAAGCTTGAAAAATTGTATTGGCTTTACCTCACAAATTGCAGCATCACTGGGAATATTCCTTTGGGGATCGGGAATCTCACTCTGCTTCAGAATCTTGAGCTTTCTGACAACCTTTTGTCTGGTGAGATTCCAGCTGATATTGGAAAGCTTCCGAGGCTGTGGCAGCTTGAGTTATATGATAACTATTTCACTGGGAAAATACCAGTTGGATTTGGCAACCTTACTAGTCTTGTTAACTTTGATGCTTCTGATAATCAGCTTGAAGGTGATCTTTCTGAGCTAAGGTCCTTGACAAAGCTTGCGTCCCTTCAGCTCTTTTTGAACCAGTTCTCAGGAGAAATTCCAAAGGAGCTTGGAGATTTCAAGAACCTCACAGAACTTTCTCTTTATAGTAACAAACTCACTGGTCCTCTTCCTCAAAAGCTTGGCTCATGGGTAGGCATGACATACGTTGACGTTTCAGACAATTCTCTTGCTGGTCCTATACCTCCTCACTTGTGCAAGAACAGCCGAATTGAAGAACTAGCAATCTTGAACAACAGCTTCATTGGAACAATACCAGAAACATATGTATACTGCACATCTTTGGCTCGTTTTCGCCTGAGCAGGAATTCGCTTTCGGGTGTTGTTCCTTCAGGCATATGGGGCTTGCCAAATTTAGAACTATTTGATCTTGAAATGAACCAGTTTGAAGGTCCACTGACATCTGATATTGCCAAAGCAAAATCTCTGGCTCAATTGTTGTTATCTAACAATAAGTTTTCAGGTGAGTTACCATTGGAAATCTTAGAAGCTTCTTCATTGGTGTCAATTCAGCTAAGTTCAAATCAAATTTCCGGCCACATTCCAGAAAGCATTGGCAAGTTGAAGAAACTAACTAGTCTTGCTTTGAATGGGAACAATCTTTCTGGTATTGTACCCGATTCCATTGGTTCTTGTACTTCTCTTAATGAGATCAACCTTGCTGGTAACTCTCTTTCTGGGGTTATACCAACTAGCATTGGTTCTCTTCCAACCCTCAATTCATTGAACTTTTCCTCAAACAAGCTTTCTGGTGAGATTCCATTTAGTTTATCATCTCTGAGACTTAGCCTTCTTGACTTATCAAACAACCAGCTGTTTGGTTCCATACCAGAACCACTGGCTATTTCAGCCTTCAAAGATGGATTCATGGGAAACCCTGAATTATGCAGCCAGACTTTGAAAGGTTTCAGACCTTGTTCAATGGAATCTAGCAGCTCAAGGAGACTCAGAAACCTATTAGTCTGTTTCGTTGCTGTTGCAATGGTCCTGCTTGGAGCGTGTTTTCTCTTCACAAAGCTAAGGCTGAACAAGTTTGAGAAGCCACTGAAGACTGCTTCCTGGGATGTCAAGCAGTACCATGTACTAAGCTTCAATGAGAATGAAATAATTGAAGGCATTAAGGCCGAGAATTTGATTGGAAAAGGAGGATCTGGGAATGTTTACCGGGTTGTGCTCAAAAGTGGGGCTGAATTTGCAGTAAAACATATATGGACTTCAAATCTAAGTGAGAGGGGAAGTTGTAGGAGCACGTCAGCAATGCTAAGAAGAACTTCACGGTCACCTGAATATGATGCAGAAGTCGCCACTCTTAGCTCTATAAGGCATGTAAATGTGGTAAAGCTCTATTGTAGTATCACAAGTGAAGACAGCAGTTTGCTTGTGTATGAGTTTTTACCAAATGGGAGCTTGTGGGACAGGTTGCACACCTGTAAGAAGACTCAGATGGGGTGGGAGGTTAGGTATGACATTGCATTGGGTGCTGCTAGAGGATTGGAGTACCTGCATCATGGGTGTGATAGACCTGTTATACATAGGGATGTGAAATCCAGTAACATATTGCTGGATGAACAATGGAAGCCAAGAATTGCAGATTTTGGCCTTGCCAAGATTCTTCAGGGAGGAGCAGGCAATTGGACCAATGTCATTGCTGGAACACTTGGATACATACCTCCTGAGTATGCCTACACTTGTAAGGTGACAGAGAAGAGTGATGTTTACAGTTTTGGAGTAGTGCTCATGGAGTTGGTGACTGGGAAGAGGCCTCTGGAGCCAGAGTTTGACGAAAATCATGACATTGTGTATTGGGTATGCAGCAATATTAGGAGCAAAGAAGATGCTCTTGAATTGGTGGATCCTACCATTCCAAAGCATTTCAAAGGGGAAGCCATGAAGGTGTTGAGAATTGCAACATTATGCACGGGGAGAATCCCAGCCTCAAGACCGTCCATGAGAATGTTGGTTCAAATGCTGGAAGAAGCAGATCCATTTACCACATCAAGAATGATTGTGACCAATGATGGTTAAATTAGGCCTACTTTGGGGTATTTTTGGGTTTTTGGTTTTAAAATTTATTAAACTAAAAATTAGCTTTGGTTTTAAGTTTTTAACTTTTTAAAAAAGGTTTCTAAATTTAAAACATTGTTTTCAATTTTAACTACACTATAATTTTTCCTCCTTAAAGACGACGGTTAATGATGGAGGTGGAGAATGAAGGTGAGTGGCTAGTGTCTGTCGGTCGGGGATAACAACTAGTGATTGTCGGCTGGAAGTGGTGGTTGTTAACAGTCGGTAAGAGGTGTTGATCAGTGATGGTAGGAGGTGATGTGTCACGACCCAAATTCATGGTTGTGACCAGCGCTAATACTAACAT 3503 0.4222 MHVDHSSPSETKPKIPTDNPFPSGHLTLTLIPLLAARMFAGGIFRFGSPPIIPSTLLFLCLVASSLSLSDELQPLFKFKSSVHSSNANVFHSWTQANSPCQFTGIICNSKGFVSEINLSQKQLEGTIPFDSLCDLPSLEKISFGTNLLNGTISEGLRKCTNLKYLDLGNNSFTGAVPDLSTLHKLEYLSLNASGISGVFPWKSFENLTRLQFLSLGDNLLDKTPFPLEVLKLEKLYWLYLTNCSITGNIPLGIGNLTLLQNLELSDNLLSGEIPADIGKLPRLWQLELYDNYFTGKIPVGFGNLTSLVNFDASDNQLEGDLSELRSLTKLASLQLFLNQFSGEIPKELGDFKNLTELSLYSNKLTGPLPQKLGSWVGMTYVDVSDNSLAGPIPPHLCKNSRIEELAILNNSFIGTIPETYVYCTSLARFRLSRNSLSGVVPSGIWGLPNLELFDLEMNQFEGPLTSDIAKAKSLAQLLLSNNKFSGELPLEILEASSLVSIQLSSNQISGHIPESIGKLKKLTSLALNGNNLSGIVPDSIGSCTSLNEINLAGNSLSGVIPTSIGSLPTLNSLNFSSNKLSGEIPFSLSSLRLSLLDLSNNQLFGSIPEPLAISAFKDGFMGNPELCSQTLKGFRPCSMESSSSRRLRNLLVCFVAVAMVLLGACFLFTKLRLNKFEKPLKTASWDVKQYHVLSFNENEIIEGIKAENLIGKGGSGNVYRVVLKSGAEFAVKHIWTSNLSERGSCRSTSAMLRRTSRSPEYDAEVATLSSIRHVNVVKLYCSITSEDSSLLVYEFLPNGSLWDRLHTCKKTQMGWEVRYDIALGAARGLEYLHHGCDRPVIHRDVKSSNILLDEQWKPRIADFGLAKILQGGAGNWTNVIAGTLGYIPPEYAYTCKVTEKSDVYSFGVVLMELVTGKRPLEPEFDENHDIVYWVCSNIRSKEDALELVDPTIPKHFKGEAMKVLRIATLCTGRIPASRPSMRMLVQMLEEADPFTTSRMIVTNDG 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01811 1005 ProSiteProfiles Leucine-rich repeat profile. 161 183 IPR001611 GO:0005515
Pste2g01811 1005 MobiDBLite consensus disorder prediction 1 20 - -
Pste2g01811 1005 Gene3D Ribonuclease Inhibitor 284 378 IPR032675 -
Pste2g01811 1005 Gene3D Ribonuclease Inhibitor 225 280 IPR032675 -
Pste2g01811 1005 ProSiteProfiles Protein kinase domain profile. 704 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01811 1005 FunFam Probable inactive receptor kinase RLK902 68 226 - -
Pste2g01811 1005 Gene3D Ribonuclease Inhibitor 70 224 IPR032675 -
Pste2g01811 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Pste2g01811 1005 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 796 1003 - -
Pste2g01811 1005 Pfam Leucine rich repeat N-terminal domain 69 108 IPR013210 -
Pste2g01811 1005 Pfam Protein kinase domain 707 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01811 1005 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 59 988 - -
Pste2g01811 1005 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Pste2g01811 1005 ProSitePatterns Protein kinases ATP-binding region signature. 710 732 IPR017441 GO:0005524
Pste2g01811 1005 SMART LRR_typ_2 159 182 IPR003591 -
Pste2g01811 1005 SMART LRR_typ_2 519 542 IPR003591 -
Pste2g01811 1005 SMART LRR_typ_2 256 280 IPR003591 -
Pste2g01811 1005 SMART LRR_typ_2 207 232 IPR003591 -
Pste2g01811 1005 SMART LRR_typ_2 351 375 IPR003591 -
Pste2g01811 1005 Gene3D Phosphorylase Kinase; domain 1 687 795 - -
Pste2g01811 1005 FunFam Leucine-rich repeat receptor-like protein kinase TDR 324 639 - -
Pste2g01811 1005 SUPERFAMILY Protein kinase-like (PK-like) 696 989 IPR011009 -
Pste2g01811 1005 SUPERFAMILY L domain-like 99 294 - -
Pste2g01811 1005 Pfam Leucine Rich Repeat 161 176 IPR001611 GO:0005515
Pste2g01811 1005 Gene3D Transferase(Phosphotransferase) domain 1 796 1000 - -
Pste2g01811 1005 FunFam Leucine-rich receptor-like protein kinase family protein 227 323 - -
Pste2g01811 1005 SMART serkin_6 704 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste2g01811 1005 SUPERFAMILY L domain-like 390 609 - -
Pste2g01811 1005 Gene3D Ribonuclease Inhibitor 379 638 IPR032675 -
Pste2g01811 1005 SUPERFAMILY L domain-like 231 463 - -
Pste2g01811 1005 FunFam Receptor-like protein kinase HAIKU2 687 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01811 Pste-Chr2 18500602 18504674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01811 58 1004 Receptor kinase-like Gene Family AT1G09970 57.636 0.0 1057
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste2g01811 Pkinase 6e-43 CL0016