Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01787 CATGAAATCTGTCATTGAGCGCTACGACAAGCTAAAAGAGGAACATCATCACCTTATGAATCCTGCTTCAGAAGAGAAGTTTTGGCAAACAGAAGCAGCAAGCTTGAGGCAACGGCTTCAGTACTTGCAAGAATGCCACAGGCAATTAATGGGTGAAGAACTAACTGGTTTGGGTATTAAAGAACTACAAAATCTGGAAAACCAACTGGAGATGAGTTTAAAGGGTGTTCGGATGAAAAAGGATCAAATTTTAACTAATGAGATTAAAGAACTACGCCAAAAGGAAAATCTCATTCATCAAGAAAATGTTGAACTTTATCAAAAGATGGACCAGATCCAAAAAGAAAATGCAGAGCTACAAAAGGAGGTTTATGAAGCAAGGAGTAAAAATGAAGAAAATGCGGCATCCAATCCTTCTTACTTAGTTAGAAATGGATATGATTTACATGCACCTATCAGTCTGCAGCTTAGTCAGCCACAGACTCAATACAGTGAACCATCAGCCAAAGCAATGAAACTCGGACAC 526 0.3878 MKSVIERYDKLKEEHHHLMNPASEEKFWQTEAASLRQRLQYLQECHRQLMGEELTGLGIKELQNLENQLEMSLKGVRMKKDQILTNEIKELRQKENLIHQENVELYQKMDQIQKENAELQKEVYEARSKNEENAASNPSYLVRNGYDLHAPISLQLSQPQTQYSEPSAKAMKLGH 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01787 175 MobiDBLite consensus disorder prediction 156 175 - -
Pste2g01787 175 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste2g01787 175 Coils Coil 102 134 - -
Pste2g01787 175 Coils Coil 59 79 - -
Pste2g01787 175 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01787 Pste-Chr2 18247906 18259458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01787 1 170 MADS-box Gene Family AT2G22630 52.941 3.90e-53 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03467 3 27289005 27299401 Pste2g01787 2 18247906 18259458 PCT