Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01777 ACTAGATTGGTCCGACTCCTAATTTTAAGACGTAACCCCCTTCCCCTCTCTAACCGATCTGAGAGCATAAACAAAGAAAAGACCTCAGCCGTTGAAAGCCGAACAGAGAAAAAGGATTTCTTTGACTTGACTTAATATGTGACATCAGAATCACGCACCCCTAAATAAAAAGCAGAAGAACACTTTGTATCTGCGTCTACCTCACTCTCCGTTGCTACGTGGAGCCTTTTCTCAACTGACAAAAGGTATCTCTTATTAACTCTTCCCACTGAATTATAACATTCTGCAAAGCAAATTCTCGTTCCTTTCAGCTATCTCTCTTGATTTCGTACCTTCATCCTTCCGATCCATCCCTTTTTCCATTCCCACATATACCATTTCTAATTTGTTTGCCTTCTTTTCATTCTCGTTTCCTTCTGCATCGTATCATCACCTAAACATATGTAAGACACGCTGTTTTATATTTTCAAAGGGTAACAGAATCTCCATACTGACACTGGAGTAACCATCCATTAAGAGAGAACAAGGTCTGGTTAATTTGTTCTTCTGGCTATATGGTTCATTTAGTTCATTAATTATCTAATTCGTAGGCTTGGTTTTATATTCCTTATAGCCAACACAGCCCACGTGTGAGCTTTGGTCAACCATGAAATAATTGTGTCATCTACATTCTACACTTTTGATAGTTCTTGACTTGGGGTAACATTTTTCTTGTAATTCCAGCTTTCAATCCAATATTTCCGACATTTTTCCATGTCTATTGCCATGTGACTTCTCTGATTTATCAGATTATAGCCTGTAAATTCTTGCTAAACTTCCTTGTGTTAGTTTCTTGAAAAGTAAACTAATATAGCTAATTGCGTTATGATGGAGTAGAAAATTATGAGTTCAAAAGGTGTTGCTGATGATTGCCTAGGATGGGCAGCAAGAGATGCATCTGGAGTTTTATCACCTTACAAATTCAGTCGCAGGACTCTTGGGAACGAAGATGTTCATATTAAAATTACACACTGCGGTGTTTGTTATGCTGATGTAATTTGGACAAGGAACAAACACGGTGACTCAATGTATCCTGTTGTTCCTGGTCATGAGATTGCTGGGATTGTGACAAAGGTTGGTTCCAGTGTACACCGTTTCAATGTTGGTGACCATGTTGGAGTGGGGACTTATGTCAATTCATGTAGGGATTGTGAGTATTGTAATGACAGAGAAGAAGTTCATTGTACCAAGGGATCTGTTTTCACTTTTAATGGTGTTGACTTTGATGGTACAATTACAAAAGGAGGATACTCCGGTTACATAGTAGTCCATGAGAGGTACTGCTTCACGATACCAAAAACCTATCCATTGGCTTCAGCTGCTCCTTTGCTTTGTGCTGGAATTACTGTTTATTCACCGATGGTGCGTCACAAGATGAATCAGCCTGGTAAATCTCTTGGGGTAATTGGTCTTGGTGGCCTTGGTCATATGGCAGTGAAATTTGGAAAGGCTTTTGGTTTGAGTGTAACAGTGTTTAGCACTAGCTTATCCAAGAAAGAGGAAGCACTGAGCCTGCTTGGTGCAGACAAATTTGTGGTTTCATCTAATCAAGAGGAAATGAAGGCAATGGCTAAATCGTTGGACTTTATAATCGACACAGCATCTGGTGACCACCCGTTTGATCCTTACATGTCACTGTTGAAGACTTATGGTGTTTTTGTGCTAGTTGGTTTCCCTAGTCATGAAGTCAAATTCAGCCCTGCAAACCTTAATATAGGATCCAAGACTGTTGCCGGAAGCATTACAGGTGGTACAAAAGATATACAAGAGATGATTGACTTCTGTGCTGCAAACGGGATTCACCCAAATATAGAGTTGATTCCTATCGAGTATGCCAATGAAGCTCTTGAGAGGCTCATAAATAGGGATGTCAAATATCGGTTTGTAATAGATGTTGAGAACTCCCTAAAAGAAACATAAGAAGTTGCTTCCGAAGTTGGATATCATTGAACTTCACCTGGTTTGATAAATAATGCCACTGAGTGTTCATAATTACTTACACAGATGTGATTCCAATCGAATATGCCATGTAAAAGTTAAGTTTTCTTTATATATTTTATGAACTAGTATGATGTGATTATTAGAATATTTTGGATTATTAAATCTTATTAATT 2153 0.3855 MSSKGVADDCLGWAARDASGVLSPYKFSRRTLGNEDVHIKITHCGVCYADVIWTRNKHGDSMYPVVPGHEIAGIVTKVGSSVHRFNVGDHVGVGTYVNSCRDCEYCNDREEVHCTKGSVFTFNGVDFDGTITKGGYSGYIVVHERYCFTIPKTYPLASAAPLLCAGITVYSPMVRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSLSKKEEALSLLGADKFVVSSNQEEMKAMAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSHEVKFSPANLNIGSKTVAGSITGGTKDIQEMIDFCAANGIHPNIELIPIEYANEALERLINRDVKYRFVIDVENSLKET 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01777 358 FunFam probable cinnamyl alcohol dehydrogenase 13 183 - -
Pste2g01777 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Pste2g01777 358 FunFam Putative cinnamyl alcohol dehydrogenase 6 322 351 - -
Pste2g01777 358 Pfam Alcohol dehydrogenase GroES-like domain 35 149 IPR013154 -
Pste2g01777 358 FunFam Cinnamyl alcohol dehydrogenase 165 321 - -
Pste2g01777 358 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 185 212 IPR029752 -
Pste2g01777 358 PANTHER ALDEHYDE REDUCTASE 9 354 IPR047109 GO:0016616
Pste2g01777 358 Pfam Zinc-binding dehydrogenase 192 315 IPR013149 -
Pste2g01777 358 Gene3D - 165 321 - -
Pste2g01777 358 Gene3D - 13 351 - -
Pste2g01777 358 CDD CAD1 12 350 IPR047109 GO:0016616
Pste2g01777 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 319 IPR036291 -
Pste2g01777 358 SUPERFAMILY GroES-like 16 183 IPR011032 -
Pste2g01777 358 SMART PKS_ER_names_mod 20 349 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01777 Pste-Chr2 18191208 18194116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01777 2 356 Monolignol Biosynthesis Gene Families AT1G72680 73.239 0.0 540