Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01764 ATGAGGGGGAAGGGAGACAAAATGGATGGACAAGAACTGTCGTTCAAAGGATCTGCATCCGTCATTCATTTCGTTGTGGATTCCATTAGCTTGAGGAAGGACCCTAATATGATTTACTGTGAAATTTGTTCCTTTCAGCCTATGGAAATTTATGTTGATGACGAGGCCAAGCTGACCCTTCATGGACTTGTGCAGCACTACATCAAATTGAAAGAGGAGGAGAAAAATCGGAAGTTGAATGATCTTCTTGATGCACTGGACTTTAATCAAGTGGTGATCTTTGTGAAAAGTGTTAGCAGAGCAGCTGAGCTGGACAAACTACTTGTGGAGTGCAACTTCCCATCTATATGTATTCACTCTGGCATGTCCCAGGAAGAAAGGTTAAAGCGTTATAAAGGTTTCAAGGAGGGTCATACAAGAATTCTTGTTGCAACAGATTTGGTTGGAAGAGGGATTGATATTGAACGTGTCAACATTGTTATTAACTATGACATGCCTGATTCTGCAGACACATACTTGCACAGGGTTGGCCGAGCTGGAAGATTTGGGACCAAAGGGCTTGCAATCACATTTGTTTCATGTTCTACTGATGTTGATGTTCTCAACAATGTTCAGTCAAGGTTTGAGGTGGATATAAAACAGCTGCCTGAGCAGATCGATACCTCTACCTATAATAGTCTTGTCTTTCATTCATTGTCGAATTTGCTCAAGAGAGTTTTACTCGATCATTCCAGAATGCTTGGATTGGTGGCTGAACGACATGGCTGCTCCGCCGTGGCGATGTTAGAACGCGACGAACCAATGCTGCTGGGTGGTGTTGGGGACGAACCGAAAGGAACCATTGGATGCGTTGGCTGA 858 0.4359 MRGKGDKMDGQELSFKGSASVIHFVVDSISLRKDPNMIYCEICSFQPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRFEVDIKQLPEQIDTSTYNSLVFHSLSNLLKRVLLDHSRMLGLVAERHGCSAVAMLERDEPMLLGGVGDEPKGTIGCVG 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01764 285 CDD SF2_C_DEAD 63 192 - -
Pste2g01764 285 Pfam Helicase conserved C-terminal domain 76 183 IPR001650 -
Pste2g01764 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 218 IPR027417 -
Pste2g01764 285 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 50 202 - -
Pste2g01764 285 FunFam DEAD-box ATP-dependent RNA helicase 59 227 - -
Pste2g01764 285 SMART helicmild6 102 183 IPR001650 -
Pste2g01764 285 Gene3D - 59 227 IPR027417 -
Pste2g01764 285 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 62 223 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01764 Pste-Chr2 18095995 18100746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01764 7 224 Eukaryotic Initiation Factors Gene Family AT5G11170 78.899 6.38e-117 338