Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01763 CTTGCTCATCCACTAACTGCGACTCGCTCATACCGTGGAGGTTTCGCTCTCTCAGTTTCTTTTCCCCAAATTGTTTTTCATCTAACAATTTACTTTGCAGCCTCTCTCAACCCTAACTTTAACCCTATTCCCCCTCACTTTCTAACCCTCCTTTCGATTCCTCATCTAGCAGATAATGGGAGAAACCAAGGACGAGACGTACGAGGAAGAGCTTCTCGATTACGACGAGGAAGAAGACAAGGCCCCCGACTCCGTCGGTGCTAAAGTCAACGGCGAAGCTACCAAGAAGGGCTATGTTGGAATTCACAGTTCAGGATTCAGAGACTTTCTCCTGAAGCCAGAGCTTCTGCGGGCTATTGTGGACTCCGGATTTGAGCATCCATCTGAAGGCAAACTATCAATTTATCTCTATCGTTTATTTTTAGTTGTTCTTCTAGGCTTTCACTGCAGTTTATGTGACGATTTTGGGGATTTTAGATTTGTGATGCGTCAGAAAAGGTTTATTTTACTTACCCTCGGTTCCTTCGGCCCTGTTTTATTTGCTTCATCATCAGTGCAACATGAGTGCATACCGCAAGCAATTCTCGGGATGGATGTAATTTGTCAAGCAAAATCTGGAATGGGAAAAACTGCTGTCTTTGTTCTCTCGACTCTGCAGCAGATTGATCCCGTTCCTGGCCAAGTTTCTGCACTTGTTCTGTGTCACACCAGAGAGTTAGCATACCAGATATGTCACGAGTTTGAGAGGTTCAGCACCTACTTGCCTGATCTAAAGGTTGCTGTCTTTTACGGTGGAGTCAACATCAAGGTTCACAAGGATTTGCTGAAGAATGAGTGCCCTCATATTGTTGTTGGAACGCCTGGAAGAATACTAGCTTTGACTAGGGATAAGGACCTTTCTTTAAAGAACGTTAGACATTTCATACTAGATGAATGTGACAAGATGCTGGAATCACTGGATATGAGGAAAGATGTACAGGACATTTTCAAGATGACTCCCCATGACAAGCAGGTTATGATGTTTTCTGCAACACTCAGCAAGGAAATCCGCCCAGTCTGCAAGAAATTTATGCAAGATGTAATGTCTCATGGCCAGTATTACTTGAATTAG 1111 0.4374 MGETKDETYEEELLDYDEEEDKAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEGKLSIYLYRLFLVVLLGFHCSLCDDFGDFRFVMRQKRFILLTLGSFGPVLFASSSVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDVMSHGQYYLN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01763 311 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 132 305 IPR014001 -
Pste2g01763 311 SMART ultradead3 120 310 IPR014001 -
Pste2g01763 311 FunFam DEAD-box ATP-dependent RNA helicase 56-like 96 306 - -
Pste2g01763 311 Gene3D - 34 304 IPR027417 -
Pste2g01763 311 MobiDBLite consensus disorder prediction 1 22 - -
Pste2g01763 311 Pfam DEAD/DEAH box helicase 126 291 IPR011545 GO:0003676|GO:0005524
Pste2g01763 311 CDD DEADc_DDX39 45 303 - -
Pste2g01763 311 MobiDBLite consensus disorder prediction 1 28 - -
Pste2g01763 311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 303 IPR027417 -
Pste2g01763 311 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 45 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01763 Pste-Chr2 18093905 18095658 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01763 1 301 Eukaryotic Initiation Factors Gene Family AT5G11200 68.543 1.20e-124 363
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01763 2 18093905 18095658 Pste2g01763 2 18093905 18095658 ECH