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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Pste2g01755
CATGCACCAAATACTTGAAAGGCGTAATCGGCATTCAGGGATCCAAGATAACCCATCTATTGGGCAACAGTTGAATGGGAAAGACTTGGGAGGATTGACAATACAAGAATTGCAGAAACTGGAGGAACTACTTCAAGGACGTTGGACCACTATTTCGAAAATAAAGGAAGCCGAACTTACGGAAGAGAACCAGAAATTGAAACAAAGCTTCGTACGAAAACAAAGGCAATCATACGAGTCAATTACCCGCAGTTCGTCTGATTTACCTCCTGACTATGGTAGTTCTGACACATCTCTCAAGTTGGGAGGAATAGAGGACTATGGTGAGAAGTGGACGCATTTAGTCGCATTTCTGTCTCTCAGACAGACAGTTGAAAAATATGGGATAAGCATGTCTGGGTTGTTTGTTTTGGGTATGTATTTACTTGTTTTTATCCTTTACATGATTCTTGTCTTGTCTTGCACCGACCCAGGGTTGCTTTTCCTTTTCCTTTCTCCATCGCCTTCCATCTTAATTAACAGTAAGTTAGGGGTTAGGAAAATGGTGAGAAAGAAGATACCCATAAAGAAGATCGACGACAGGAAAAGTGGTCTTTTCAAGAAGGCACGGGAGCTCTCTCTTCTTTGTGATGCTGAGATAGCACTCATTGTCTTTTCACCTGCTGGCAAGCTCTTCGACTATGCTAGTTCAAGGTACGTTTTTTCCTCTTCCCTCCTCAAATTCACCTCTCACACTACTTATTTTGGCTGC
751
0.4234
MHQILERRNRHSGIQDNPSIGQQLNGKDLGGLTIQELQKLEELLQGRWTTISKIKEAELTEENQKLKQSFVRKQRQSYESITRSSSDLPPDYGSSDTSLKLGGIEDYGEKWTHLVAFLSLRQTVEKYGISMSGLFVLGMYLLVFILYMILVLSCTDPGLLFLFLSPSPSILINSKLGVRKMVRKKIPIKKIDDRKSGLFKKARELSLLCDAEIALIVFSPAGKLFDYASSRYVFSSSLLKFTSHTTYFGC
250
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Pste2g01755
250
ProSiteProfiles
MADS-box domain profile.
171
231
IPR002100
GO:0003677|GO:0046983
Pste2g01755
250
SUPERFAMILY
SRF-like
181
234
IPR036879
GO:0003677|GO:0046983
Pste2g01755
250
SMART
madsneu2
181
230
IPR002100
GO:0003677|GO:0046983
Pste2g01755
250
MobiDBLite
consensus disorder prediction
1
22
-
-
Pste2g01755
250
PANTHER
SERUM RESPONSE FACTOR HOMOLOG
183
231
-
-
Pste2g01755
250
PRINTS
MADS domain signature
208
229
IPR002100
GO:0003677|GO:0046983
Pste2g01755
250
PRINTS
MADS domain signature
193
208
IPR002100
GO:0003677|GO:0046983
Pste2g01755
250
Pfam
SRF-type transcription factor (DNA-binding and dimerisation domain)
194
227
IPR002100
GO:0003677|GO:0046983
Pste2g01755
250
Coils
Coil
56
76
-
-
Pste2g01755
250
Gene3D
-
179
246
IPR036879
GO:0003677|GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Pste2g01755
Pste-Chr2
18040450
18045689
Proximal
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Pste2g01755
157
231
MADS-box Gene Family
AT5G51870
48.235
6.02e-16
72.4
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
MADS-M-type
Pste2g01755
SRF-TF
2.2e-15
No_clan
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Pste3g03419
3
26924678
26932232
Pste2g01755
2
18040450
18045689
PCT
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