Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste2g01752 TTTTAAAATCCTAACATGTAAACACTTGATGAAGATTGTTGGAACGAGACTATATGCAACAGTTGATTTAGACAAGGCAAGGGTAGGACGAACGAGAATGATAGGAAACGAACCTACCCACCCCAAATGGAATGAGTCGTTTGAAATCTATTGTGCCCATCATATCTCAAACATTGTATTTACTGTCAAAGATGGTAACCCAATTGGAGCAACTCTAATAGGAAGAGCCTATGTCCCCGTGGAGCAAGTTATTAAGGGCTCCATAGTTAAGCGTTGGGTTGAGATATTAGATGAAGATCACCGTCCCGTACCAGGTCACTCCAAAATCCGTGTCAGTGTCAAATTTTGCGATGTCACTAAGGACGAAACATGTTTATGGTCACAGGGAATACACATGCCTTTTTTTGGAGTTCCTCGTACATTTTTCAATCAAAGAGAAGGTTGCAAAGTTACTTTATACCAAGATGCTCACGCCCAACGTGGCCTTGGTGTTCTCCCTTATATTCCTATATCCCAAGGAAGAGACTACATGCTTTCAAGATGTTGGGAAGACATTCACAAAGCCATTAGTGAAGCTGAGTACTTTATTTACATAGCTGGTTGGTCTCTTTACACTGAAATATCCTTAGTTAGAGACACAGGTGAATCACAAGAAACCCTTGGGGAGTTACTTAAGAAGAAAGCTGATCAAGATGTCAAAGTTCTTTTGCTTATTTGGAATGACATAAATGGCTTGATGGAAACAAATTGTCAAGAAACTGCTGATTACTTTAAAAACACAAATGTGCATTGTGTTTTGTGTCCACGGTACCCGGATGATGGAAGAACCATAATTCAAGGCCTTCAAACCTCAACAATGTTCACACATCACCAAAAGAGTGTAGTTGCTGATGTCCATGCTGAAGGATCACAAAAGCGAAGTATCATAAGTTTCATGGGTGGCCTTGATCTTTGTGATGGGAGGTATGATACCAGGGATCATCCTTTATTTTCAACATTGGGTACAGTGCATAGACATGATTTCCATCAGCCAAACTTCCCAAATTCTTCCATAGATAAAGGTGGTCCAAGAGAACCATGGCATGACATTCATTGCAAGCTAGAAGGACCTATTGCTTGGGATGTCTTGTACAATTTTGAGCAAAGGTGGCAGAAGCAAGTTGGGAACAACTTTATATTCTCAATTGATGATATTGATCAAATTCTGATCCACCCAGCTGAAGCACAAAAATCAGAAGTAGGAGTTGAAGATACATGGACTGTTCAATTGTTTAGATCCATCGATGGTGGTGCTGCTGCTTTTCGCCCTGCTCAAGCCCGAGATGAATTTGCTGAATTAGGCCTTATTAGTGGGAAAGATAATCTCATTGAGAGAAGCATTCAGGATGCTTACATTAATGCTATTAGGCGTGCAAAAAATTTCGTCTACATTGAGAACCAATACTTCCTAGGAAGTTCATATGGCTGGCAAACCACTGATGATATTGTGGTTGAGGACATTGGTGCTTTGCAGCTTATACCAAAGGAATTGTCACTGAAGATTGTAAGCAAGATAGAAGCAAAAGAAAGGTTCTCTGTGTACATAGTACTCCCAATGTGGCCAGAAGGTGTACCTGAAAGTGATTCAGTTCAAGCAATATTAGATTGGCAAAGGAGGACCATGGAGATGATGTATTGTGACATTGCTAATGCCTTGAAAAAAACAGGAATTCAAGCACAGCCTCGAGATTATTTAACATTTTTTTGCCTTGGCAAGAGGGAGCATAAGAATTCAGAAGACTGTCCTCATCCAGAGGAACCAGAGCCTGGGAGTAACTATAGAAAAGCACAAGATTCTAGAAGGTTCATGATCTATGTTCATTCCAAAATGATGATAGTTGACGACGAATACATAATTGTTGGTTCTGCTAATATCAATGAAAGATCAATGGAAGGTGCAAGAGACACTGAGATTGCAATGGGGGCATTCCAACCACGTCATTTAGCATCAAAAGGGCGACCTAGAGGGGATATATATATTTTCAGACGTGCACTATGGTATGAACACCTTGGTAATGATGGTTTTGATGCAAACATCTTGGACAATCCAGAACATTTGGATTGCATCAATCTTGTGAATGATCTTGCTGAAGCCAACTGGGACATGTACTCAAATGAAACATTTGTTGAGAACATTCGACCATTTCACCACCTCATGCGCTACCCTGTAGATGTAACTAATGATGGAGCCATAACAACCCTTCCAGGATTTGAATATTTTCCTGACACCAAGGCTCCAATTTTGGGTTGCAAAGCAAAACTCCTTCCTCCAATTCTCACCACC 2323 0.4046 MKIVGTRLYATVDLDKARVGRTRMIGNEPTHPKWNESFEIYCAHHISNIVFTVKDGNPIGATLIGRAYVPVEQVIKGSIVKRWVEILDEDHRPVPGHSKIRVSVKFCDVTKDETCLWSQGIHMPFFGVPRTFFNQREGCKVTLYQDAHAQRGLGVLPYIPISQGRDYMLSRCWEDIHKAISEAEYFIYIAGWSLYTEISLVRDTGESQETLGELLKKKADQDVKVLLLIWNDINGLMETNCQETADYFKNTNVHCVLCPRYPDDGRTIIQGLQTSTMFTHHQKSVVADVHAEGSQKRSIISFMGGLDLCDGRYDTRDHPLFSTLGTVHRHDFHQPNFPNSSIDKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWQKQVGNNFIFSIDDIDQILIHPAEAQKSEVGVEDTWTVQLFRSIDGGAAAFRPAQARDEFAELGLISGKDNLIERSIQDAYINAIRRAKNFVYIENQYFLGSSYGWQTTDDIVVEDIGALQLIPKELSLKIVSKIEAKERFSVYIVLPMWPEGVPESDSVQAILDWQRRTMEMMYCDIANALKKTGIQAQPRDYLTFFCLGKREHKNSEDCPHPEEPEPGSNYRKAQDSRRFMIYVHSKMMIVDDEYIIVGSANINERSMEGARDTEIAMGAFQPRHLASKGRPRGDIYIFRRALWYEHLGNDGFDANILDNPEHLDCINLVNDLAEANWDMYSNETFVENIRPFHHLMRYPVDVTNDGAITTLPGFEYFPDTKAPILGCKAKLLPPILTT 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste2g01752 765 SMART C2_3c 3 83 IPR000008 -
Pste2g01752 765 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 606 633 IPR001736 GO:0003824
Pste2g01752 765 SUPERFAMILY Phospholipase D/nuclease 449 675 - -
Pste2g01752 765 Pfam Phospholipase D C terminal 683 755 IPR024632 -
Pste2g01752 765 Gene3D Endonuclease Chain A 163 392 - -
Pste2g01752 765 Pfam Phospholipase D Active site motif 607 633 IPR001736 GO:0003824
Pste2g01752 765 Pfam Phospholipase D Active site motif 276 312 IPR001736 GO:0003824
Pste2g01752 765 PIRSF PLD_plant 1 765 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste2g01752 765 Gene3D C2 domain 5 118 IPR035892 -
Pste2g01752 765 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 108 IPR035892 -
Pste2g01752 765 SMART pld_4 276 312 IPR001736 GO:0003824
Pste2g01752 765 SMART pld_4 606 633 IPR001736 GO:0003824
Pste2g01752 765 Gene3D Endonuclease Chain A 425 650 - -
Pste2g01752 765 PANTHER PHOSPHOLIPASE D 7 753 IPR015679 -
Pste2g01752 765 SUPERFAMILY Phospholipase D/nuclease 128 379 - -
Pste2g01752 765 ProSiteProfiles C2 domain profile. 1 84 IPR000008 -
Pste2g01752 765 Pfam C2 domain 8 85 IPR000008 -
Pste2g01752 765 CDD C2_plant_PLD 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste2g01752 Pste-Chr2 18020341 18022804 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste2g01752 6 765 Phospholipase D Gene Family (Wang group) AT3G15730 60.052 0.0 934
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01752 2 18020341 18022804 Pste2g01752 2 18020341 18022804 ECH
Pste2g01751 2 18005135 18008030 Pste2g01752 2 18020341 18022804 ECH